Shewanella baltica OS185: Shew185_2615
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Entry
Shew185_2615 CDS
T00571
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm03030
DNA replication
sbm03430
Mismatch repair
sbm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Shew185_2615
03430 Mismatch repair
Shew185_2615
03440 Homologous recombination
Shew185_2615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbm03032
]
Shew185_2615
03400 DNA repair and recombination proteins [BR:
sbm03400
]
Shew185_2615
Enzymes [BR:
sbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Shew185_2615
DNA replication proteins [BR:
sbm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Shew185_2615
DNA repair and recombination proteins [BR:
sbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Shew185_2615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_14
PIF1
ResIII
DNA_pol3_delta
TsaE
AAA_2
AAA_assoc_2
AAA_18
Adeno_E1B_55K_N
Motif
Other DBs
NCBI-ProteinID:
ABS08750
LinkDB
All DBs
Position
complement(3120785..3124198)
Genome browser
AA seq
1137 aa
AA seq
DB search
MSNHDMLSFKVLGAHAPALVSHTLGSSMSYQVLARKWRPATFDQMVGQSHVLHALTNALS
QQRLHHAYLFTGTRGVGKTSLARLFAKGLNCEQGVTATPCGVCGSCVEIAQGRFVDLIEV
DAASRTKVDDTRELLDNVQYRPTRGRFKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFL
LATTDPQKLPVTVLSRCLQFNLKSLTQSEIGTQLNHILTQEQFPFEAEALKLLAKAANGS
MRDALSLTDQAIAFGGGSVMLTQVQTMLGSIDEQHVVALLKALTDADIGVLMHTCAQVLA
YGADAQEVLRSLLELLHQITLTQFAPVCAQQSLYSAQIRAFAEQLTPEQVQLYYQILLTG
RKDLPHAPDPKSGLEMALLRAVAFVPEKPVKRWQPDAVAEIRLPEGQTPVAATAAAQAPH
VNEPQFAETHTAEPHTTQTVPAEKKTALIEQTCANQQVETAQAAAVDMADVSIEPADTVE
QALDAELEADAALIAEQAVILSQAQSQGFNADSLNAYTVNAEVEPQTQTVSTAQAPSIHI
SEPVADIEASVASLDAHNSEVPELIGATAESSIVNPAMAETVVGSTSADNNSAAENTLDN
NPTANNTLEQNGLDEHSPYGTEAEHSYPAMGDYAQESAPLDSYQDAYVEFSSGSYNDDDF
HHGFESHAVPDDVQHSANVQHSDSVQHSADVQSAASIQSALGMQGSVDSQSAAMAQVSPQ
TLTPISIPTLASASLADDDILSAVLAARDSLLSDLDALSVKDGDEKKSSLDSKLKTPNSK
ANGISLSKPASKSDASKTSASFSADPAADLDPDLTIDFDDDFDLDLEPIALHQSVPSAAS
ASGSVPAEPVKPATYDRPPWEAAPEVASTAELIETTQVDSGNTNIADAVMAQGSDINDDS
ASSCQGSLETSNTANDGQNNAAYGNDSRSAEQDSGSKSQALQTQARHQDKVQATALTPAS
TTALTQTASAVERTQEREVALSTLPISGHPLDLHWYKLMASLEIGGRVRQLAVNSVCQTQ
SDPLPLLLKPNQKHLAADVAIVQLEQALSAALGNPRRVQVVIGIDAQRETPLELRKRFHQ
ELLQQAHQSLIHDDNVQWLIQRMGAELDADSLVYPPELLNLRSQQIQALPELTEAAS
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcatgacatgttatctttcaaagttctcggggcgcatgctcccgctcttgta
tcacatactctggggagttccatgtcatatcaggtgttagccagaaaatggcgccctgcc
acatttgatcaaatggttggccaaagccatgttttgcatgccttgaccaatgcgttaagc
cagcagcgcttacatcatgcatacctgtttacgggaacgcgcggtgtcggtaaaaccagc
ttggcgcgactctttgccaaaggcttaaattgcgaacaaggcgtgacagcgactccctgt
ggtgtttgcggcagctgcgtggaaatcgcgcaaggtcgttttgtcgatttaattgaagtc
gatgccgcgtcccgcactaaggtcgatgacacccgtgagctgttagacaatgtgcagtat
cgtccaacccgtggccgttttaaggtttatctcatcgacgaagtgcatatgctgtcgcgc
agcagttttaacgcactgctaaaaaccttagaagaaccccccgagcacgttaaatttctt
ttggcgacaactgatccacagaaactgcccgtgactgtgttatcccgttgtttgcaattc
aatttaaaaagccttacccaaagcgaaattggcactcagctcaatcatattttgacccaa
gagcagtttccctttgaggctgaagccttaaagcttcttgccaaagccgccaatggcagt
atgcgtgatgccttgagtttgaccgatcaagcgatcgcctttggtggcggtagtgtgatg
ctcactcaagtgcaaactatgcttggcagtattgatgagcagcatgtggttgccttgctt
aaagccttaaccgatgccgatattggcgtgttaatgcacacctgtgcccaagtgctggcg
tacggcgccgatgcccaagaagtgctgcgcagtttgcttgagctgttacatcaaattact
ttgactcaatttgccccagtttgcgcgcagcaatctttatatagcgcgcaaattcgcgcc
tttgctgagcagctgacgccggagcaagtgcagctttattatcagattttattaacgggc
cgcaaagatttaccccatgcaccagatcctaaatcgggtcttgagatggcgctgttacgg
gctgttgcctttgtgccagaaaagccggtaaagcgctggcagcctgatgcggtcgctgag
atccgtttacccgaagggcaaacgcccgttgcggcaactgctgcagcgcaagctcctcat
gtaaatgaaccacagtttgctgaaacacatacagctgaaccgcataccactcaaacagtg
cctgctgaaaaaaaaacagcattaattgagcaaacttgcgctaaccagcaagttgaaacc
gcgcaagcggccgctgttgacatggctgacgtgtcaattgagccagcagatactgtagag
caggcgcttgatgctgagctcgaagcggatgcggcattaattgccgaacaggcggtgatt
ctaagtcaggcgcagagtcagggatttaacgctgacagcttaaacgcttacacagttaat
gctgaggtagagcctcaaactcaaacagtatcaaccgctcaagcgccttctatacacatt
tctgaacccgttgctgacattgaagcatcggttgccagtcttgatgctcataatagtgaa
gttcctgaattaattggggcaactgccgagtcgagtattgttaatccagctatggctgaa
acggttgttggttcaacatctgctgataacaacagcgcagctgagaacacactggataac
aatcccaccgctaacaacacgcttgagcaaaatgggcttgatgaacatagtccctatgga
actgaagccgagcattcatatccagcgatgggagattatgcccaagagtcagcgccgctc
gattcctatcaagatgcttatgttgaattctcttccggctcttacaatgatgacgatttt
catcacggctttgagtctcatgctgtgcctgatgatgttcaacactcagctaatgttcaa
cactcagatagtgttcaacattctgctgatgttcaaagcgcagcaagtattcaaagtgct
ttaggcatgcaaggctctgttgatagtcagtcagctgcaatggctcaagtgtctcctcag
acactaactccaatttcaattccaacactagcctccgcatccttagccgatgatgatatt
ctctcggctgtgttggctgcgcgagattcactgttatcggatctcgacgccttaagtgtt
aaggacggtgatgaaaaaaagtcgtcactggactcaaagttaaagacaccaaacagtaaa
gccaatgggatcagtttatcaaaacctgccagtaaaagtgatgcaagtaagacaagtgcg
tcattctctgccgatcccgccgctgatttagatcccgatttaacaatagatttcgatgat
gattttgacttagatcttgagccaattgctctgcatcaatcagtgccttcggctgcaagc
gcatcaggttctgtccctgctgaaccagtcaaaccggcaacatatgatcgtccaccttgg
gaggctgcgccagaagtagcgtccacagctgagcttatcgaaacgactcaggttgatagc
ggcaatactaatatcgctgatgctgtgatggctcaaggctctgatataaatgatgactct
gccagcagttgccaaggatctttagagactagcaacactgccaatgacggacagaataat
gcggcatatggcaatgactcccggagtgctgagcaggattcaggttcgaagtcacaagcg
cttcaaactcaagcaaggcatcaagataaagtgcaagctaccgcattaacgccggctagc
acgactgcactgactcagacggctagcgctgttgagcgcacgcaggagagggaagtcgcg
cttagtacacttccgatcagcggtcatccattagatttgcattggtacaagttgatggcg
agcttagagatcggcgggcgagtacggcaactggcggttaattccgtttgccaaacccag
agcgatcctttgccgctgctgcttaagccaaatcagaaacatcttgcggccgatgtcgcc
atagtacagcttgagcaagccttaagtgctgcgcttgggaacccaagacgggtacaagtg
gtcataggaatcgatgcgcagcgggaaacgcctttagagttacgtaaacgtttccaccaa
gagttgctgcaacaggcgcatcaatcactgatccatgatgacaatgtgcaatggttgatc
caacgtatgggcgccgaactcgatgccgacagtttagtgtatccgcccgagttgttgaat
ttacgcagtcagcaaatacaagcgttacctgagttaactgaggcggcgagttaa
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