KEGG   Shigella boydii Sb227 (serotype 4): SBO_0308
Entry
SBO_0308          CDS       T00301                                 
Symbol
ribD
Name
(GenBank) bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
sbo  Shigella boydii Sb227 (serotype 4)
Pathway
sbo00740  Riboflavin metabolism
sbo01100  Metabolic pathways
sbo01110  Biosynthesis of secondary metabolites
sbo01240  Biosynthesis of cofactors
sbo02024  Quorum sensing
Module
sbo_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:sbo00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SBO_0308 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SBO_0308 (ribD)
Enzymes [BR:sbo01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SBO_0308 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SBO_0308 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: ABB65021
ShiBASE_China: SBO0308
UniProt: Q325I7
LinkDB
Position
322426..323529
AA seq 367 aa
MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAG
EKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGI
DVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDV
QRLRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPVRIVIDSQNRVTP
EHHIVQQPGETWFARTQEDSREWPETVRTLLIPEHKGHLDLVVLMMQLGKQQINSIWGEA
GPTLAGALLQAGLVDELIVYIAPKLLGSDARGLCTLPGLEKLADAPQFKFKEIRHVGPDV
CLHLVGA
NT seq 1104 nt   +upstreamnt  +downstreamnt
gtgcaggacgagtattacatggcgcgggcgctaaagctggcgcaacgaggacgttttacc
acccaccccaacccaaatgtcgggtgcgtcattgtcaaagatggcgaaattgtcggtgaa
ggttaccatcaacgagcgggtgaaccacatgccgaagtacacgcgttgcgtatggcgggt
gaaaaagccaaaggtgcaacggcgtatgtgacactcgaaccttgcagccatcacggccgt
acgccgccttgctgtgatgctttaattgccgcaggtgtggcgcgcgtggttgcctcgatg
caagatcctaacccgcaggtcgctgggcgtggactttaccgtctgcaacaggctggcatt
gacgtcagccacggcctgatgatgagtgaagccgagcaattgaataaaggctttctcaag
cggatgcgcaccggctttccttatattcagttaaaacttggcgcatcgcttgatggtcgc
acggcgatggcgagcggcgaaagccagtggatcacttcgccccaggcgcggcgtgatgta
caacgactgcgcgcgcaaagtcatgccattttaaccagcagcgccacggtgctggcggat
gatcctgccttaacggtgcgttggtccgaactggatgaacaaactcaggcgctctacccg
caacaaaatctccgccagccggtacgtattgtgattgatagccaaaatcgcgtgacgccg
gaacatcacattgtgcagcagcccggcgaaacctggttcgcgcgtacgcaggaagattct
cgtgagtggccggaaacggtgcgtaccttgctgattccagagcataaaggtcatctggat
ctggttgtactgatgatgcaactgggtaaacagcagattaacagcatctggggggaagcg
gggccaacgctcgctggcgcattgctgcaggcgggtttagtcgatgagctgattgtctat
atcgcacctaaactattaggcagcgacgcccgtggattatgcaccctgccagggcttgag
aaattagccgacgccccccaatttaaattcaaagagatacgtcatgtaggcccggatgtt
tgcctgcatttagtgggtgcatga

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