Shigella boydii Sb227 (serotype 4): SBO_0389
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Entry
SBO_0389 CDS
T00301
Symbol
ybbI
Name
(GenBank) putative transcriptional regulator
KO
K19591
MerR family transcriptional regulator, copper efflux regulator
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbo03000
]
SBO_0389 (ybbI)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
sbo01504
]
SBO_0389 (ybbI)
Transcription factors [BR:
sbo03000
]
Prokaryotic type
Helix-turn-helix
MerR family
SBO_0389 (ybbI)
Antimicrobial resistance genes [BR:
sbo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
SBO_0389 (ybbI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR-DNA-bind
MerR
DUF1836
Phytochelatin
Motif
Other DBs
NCBI-ProteinID:
ABB65100
ShiBASE_China:
SBO0389
UniProt:
Q325A8
LinkDB
All DBs
Position
407815..408222
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AA seq
135 aa
AA seq
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MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNL
EESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMRDQLLALANACPGDDSADC
PIIENLSGCCHHRAG
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcagcgatgtagcaaaaattaccggcctgactagcaaagccattcgcttctat
gaagagaaggggctggtgacgccgccgatgcgcagcgaaaacggttatcgcacctacacg
cagcagcatctcaacgaactgaccttactgcgccaggcacggcaggtgggctttaacctg
gaagagagcggcgagctggtgaatctgtttaacgacccgcagcggcacagcgccgacgtc
aaacggcgcacgctggagaaggtggcggagatcgaacgacacattgaggagctgcaatcc
atgcgcgaccagctgctggcactggcgaatgcctgccctggcgatgacagcgccgactgc
ccgattatcgaaaatctctccggctgctgtcatcatcgggcagggtga
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