Shigella boydii Sb227 (serotype 4): SBO_3059
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Entry
SBO_3059 CDS
T00301
Symbol
yggD
Name
(GenBank) putative transcriptional regulator
KO
K01774
fumarate hydratase E [EC:
4.2.1.2
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00020
Citrate cycle (TCA cycle)
sbo00620
Pyruvate metabolism
sbo01100
Metabolic pathways
sbo01110
Biosynthesis of secondary metabolites
sbo01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SBO_3059 (yggD)
00620 Pyruvate metabolism
SBO_3059 (yggD)
Enzymes [BR:
sbo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
SBO_3059 (yggD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MtlR
Motif
Other DBs
NCBI-ProteinID:
ABB67565
ShiBASE_China:
SBO3059
UniProt:
Q31WJ3
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All DBs
Position
3058349..3058858
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AA seq
169 aa
AA seq
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MAKLTEDDVLEQLDAQDNLFSFMKTAHSILLQGIRQFLPSLFVDNDEEIVEYAVKPLLAQ
SGPLDDIDVALRLIYALGKMDKWLYADITHFSQFWHYLNEQDETPGFADDMTWDFISNVN
SITRNAMLYDALKAMKFADFAVWSEARFSGMVKTALTLAVTTILKELTP
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagctgacagaagatgatgtgcttgagcaactggatgcacaggacaatttattt
tcatttatgaaaactgcgcattctattttgctccaggggatacgccagtttctgccgtcg
ctgtttgtcgataacgatgaagagatcgtggaatatgcagtgaagccgttactcgcccaa
agcggcccgcttgacgatattgatgttgcgctgcgtttgatttatgcgctggggaaaatg
gataaatggctgtacgccgatatcacgcatttttcccagttctggcattacctgaacgaa
caggatgaaacgcccggatttgccgatgacatgacctgggattttatcagcaacgtcaat
agcataacccgcaatgcgatgctctatgacgcgttgaaagcgatgaagttcgccgatttc
gccgtctggtcagaggcgcgttttagcgggatggtcaaaacggcgctgacgctggcagta
acgacaatcttaaaggaattaacgccgtga
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