Fretibacterium fastidiosum: SY1_09540
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Entry
SY1_09540 CDS
T02602
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sbr
Fretibacterium fastidiosum
Brite
KEGG Orthology (KO) [BR:
sbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbr03400
]
SY1_09540
DNA repair and recombination proteins [BR:
sbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SY1_09540
Archaeal homologous recombinant proteins
SY1_09540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
AIG1
Motif
Other DBs
NCBI-ProteinID:
CBL28207
UniProt:
D4M8L2
LinkDB
All DBs
Position
complement(1060294..1061499)
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AA seq
401 aa
AA seq
DB search
MKFFHLSDLHIGLKLINRDLREDQEYVLDQIVRAAGEVSPDAVVVAGDIYDKAIPSVESV
ELFDRFVSKLAGAVPTAEIMMISGNHDSGPRVNLFRSVLQRRGIHMVGLPPRTPEDFIEK
VVLWDEFGPVNFYLLPFVKPSMVRLVLDAGADASGGGDEAADATPRGLSYDEALHRLIDR
ETIDPEQRNVLVSHQFYLPSGAVPSGVERMDSEVRTVGDIDGVRSDVLERFDYAALGHMH
KPMEVGNERCRYCGTPLACSVSEAGQQKGIIVVELGEKGSVKTSVLPLTPLREVRVITGA
FSEVLGQGCEDYVTVVLTDKEDLDVLDMQDRLRACFPNLLEIRRELPQRAGDRAGRGAAE
AEMSPFELCGSFLKEQWGGRELDEEERSLLQDVINSVQEAH
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctttcacctgtcggatctgcacatcggcctgaagctcatcaaccgggacctt
cgggaggatcaggagtacgtccttgaccagatcgtgagggctgccggggaggtgagcccc
gacgccgtcgtcgtcgccggagacatctatgataaggcgatcccctccgtcgaatcggtg
gagctcttcgaccgcttcgtctcgaagcttgcgggagcggtccccacggcggagatcatg
atgatcagcggcaaccacgacagcggcccgcgggtcaacctctttcgaagcgtgctgcag
cggcggggaatccacatggtgggtctcccgccccggaccccagaggatttcatcgagaag
gtggtgctttgggacgagtttggccccgtgaacttctacctgctccccttcgtgaagccc
tccatggtgaggctcgtcctggatgcgggcgcagacgcatcgggcggcggggatgaggct
gcggacgcaacgccgcggggcctttcctacgacgaggcgctgcaccggctgatcgatcgg
gagacgatcgacccggagcagcggaacgtcctggtgagccaccagttctacctgccctcc
ggggccgtcccgtcgggagtggagcgcatggactccgaggtgcgcaccgtcggcgacatc
gacggggtgaggtcggacgtcctggagcgctttgactacgcggcgctggggcacatgcat
aagccgatggaggtcggcaacgagcgctgccgctactgtggaacacctctggcctgttcc
gtaagcgaggcggggcagcaaaagggcatcatcgtggtggagttgggggaaaagggctct
gtgaagacctccgtcctgcccctgaccccgctccgcgaggtccgcgtcataaccggcgcc
ttttccgaggtcctgggccaggggtgcgaggactacgtgacggtggtcctgacggacaag
gaggacctggacgtcctcgacatgcaggatcgccttcgcgcctgtttcccgaacctcctc
gaaatccggcgggagctcccgcaacgggcgggcgaccgtgccgggcggggggcggcggag
gcggagatgagcccctttgagctttgtggctcctttctgaaagaacagtggggcggcagg
gagctggacgaggaggagcgctcgctccttcaggatgtgatcaacagcgttcaggaggcg
cactga
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