Shewanella baltica OS117: Sbal117_3373
Help
Entry
Sbal117_3373 CDS
T02013
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sbs
Shewanella baltica OS117
Brite
KEGG Orthology (KO) [BR:
sbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbs03016
]
Sbal117_3373
Enzymes [BR:
sbs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Sbal117_3373
Transfer RNA biogenesis [BR:
sbs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Sbal117_3373
Prokaryotic type
Sbal117_3373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AEH15052
UniProt:
A0A7U3ZD55
LinkDB
All DBs
Position
complement(3889881..3890846)
Genome browser
AA seq
321 aa
AA seq
DB search
MARRPKGRFIDGIVLLDKSTGMSSNFALQRVKRFFNANKAGHTGALDPLATGMLPVCLGE
GTKFSQHLLDADKRYLVTAKLGERTDTSDSDGEVVQTRAIDFTEAQLLTALDFFRGETQQ
VPSMYSALKYQGQPLYKYAREGIEVPRESRPITVFELNFIGLEGDELTLDIHCSKGTYIR
TIIDDLGEMLGCGAHVIMLRRTQVAQYPYARMVSLEQLEALVAQAHEQQIDPSILLDPLL
LPMDTAVADFPEVNVPDAIAPYLMQGQAVRVPVNAGLKTDELVRITLGDIRRFVGIGTMN
EDGLLAPKRLIVIHDEPAETD
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtccaaaaggtcgttttatcgatgggatagtgctgctggataaatccacg
ggcatgagttctaactttgcattgcaaagggtaaagcgcttttttaatgcgaacaaagca
gggcatacgggcgcactcgatccgttagcgacaggtatgttacctgtgtgcttaggcgaa
gggactaagttttcccagcatctgttagatgccgataaacgttatttagtcaccgcaaag
ctgggcgagcgaacggataccagtgattccgatggcgaagtggtgcaaacccgcgccatt
gattttactgaggcgcagttattaaccgcgcttgatttcttccgtggtgagactcagcaa
gtgccttctatgtattccgcgcttaaatatcagggccagcccctgtataaatatgcccgt
gaaggcattgaagtgccgcgcgaatctcgccctattacggtatttgagcttaatttcatc
ggtcttgaaggcgatgagctgaccttagacattcattgttctaagggcacttatatccgc
actatcatagacgacctcggtgaaatgctcggttgtggcgcccatgtcatcatgttgcgt
cgcactcaagttgcacaatatccctatgcaagaatggtgtccttagaacaacttgaagcg
cttgttgctcaagcacatgaacaacagatagatccgagtatacttcttgatccgctgtta
ttacctatggatacggctgtggccgatttccctgaggtgaatgtgccagatgcaatcgcc
ccttacttaatgcaaggtcaggctgttcgggtccctgttaatgcaggcttgaaaaccgat
gaactggtgcgtatcactttaggtgacattcgccgatttgtggggattggcactatgaac
gaagacggcctactcgcgccgaaacgactcatagtgatccatgacgagccagcagaaact
gattag
DBGET
integrated database retrieval system
