Sphaerochaeta globosa: SpiBuddy_1708
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Entry
SpiBuddy_1708 CDS
T01439
Name
(GenBank) PKD domain containing protein
KO
K20276
large repetitive protein
Organism
sbu
Sphaerochaeta globosa
Pathway
sbu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sbu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SpiBuddy_1708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BiPBP_C
PKD_3
Ig_3
I-set
Big_7
Y_Y_Y
PKD_4
PKD
LapA
BatD
Motif
Other DBs
NCBI-ProteinID:
ADY13533
UniProt:
F0RZI1
LinkDB
All DBs
Position
1861770..1868639
Genome browser
AA seq
2289 aa
AA seq
DB search
MTFRVPEIPYYSDSTIPNTSTTKLSISGPGVTEVLTKNHNRVTASASDALKGYPGDLPNG
EVTYDLSGITFRAGETYSFAIEFKDAAGYLVDSTTTSIKFPTPKFATSVDLSSPFRPEFS
WSFNDDYESWVKEYRIYLNGQYYGYTTSNSYTPNTLLVPSTTYTWHVMPINKDNTNFFPS
TSGIIKSFTTIAHTNLSIDVEDPINNAVLFVGQSYNFLATPTFSDDATQKSAQWRIGTET
KNGTSIAYTPTRRYPANSLLAYINVVDSLNLSKDSSKLYLTVLDPAIALQGGTTRTVAQD
SSLTLSLDTQASKDLQNVSWYLDNTVIGEGNSISYTFSESGTFTLFARGTSPADINGNTK
TVQSANQTITAVGSGPVVAITRPTKEVEIVLGTSLDLLSQVSGDNTIQSTQWTYSGAASG
SFSTSSSQASFNPTSVGDYTITLTATDIYQKASSSSLRVLVIDPQIAITSPLTQSVHPLT
ASLTPVINAPNADRVVWFFNNKLINGSTLDLSSIGIGTYTLYARAFWNVVDPLGNPKEYG
ESSNPVSITIKDLQPPVIILTSPSDGSKLVAGKSYTLSAEVSSASPITSQYWEVDGARLT
GTTYTPAASIQKKLVNATYHAVNRDGVRSSKSIQLQIANPAVYSTKPSVAAYVTGSRIPI
AASVVDGDLFWQIDGIEVPDWDYTITKTGTHTIRAGYKVEALNPSGGLTTFTGLEANSFN
LTVYSEKPPVITTFTPATSLISQVQNKPVVFMVKGASENTLITPEWTIHSADTEIRRVTA
ESISHQSWGPGLYTVRASIADAYGQKVTQEWRVRIINPTVVITNPKSNMQFAKGQIPIPT
LEGVDVVSYAMTLNGTAITDQFNWNSLAVGQYTLAVSGLYNLTGTSELQRTEPQIVTFRV
VDRTPPKFEVSGLVDNDRLIAGLAYNFMVRGETDETFTWLLDGTVVGANERLAIQFPKNK
KNAVLTVRALRNEISVDRNFNVRILDPYYSIIMPQILNTYKFYPAGTPLPLMAESRDIDR
LVWMVDTQLHSGSTVTLNPGKHSIDLKGIATSVRLTDGTLGEYEPTNQSGISGRDIDVAT
MPYVGSITAPDSVQEGQRVTVTANLVMQQSTDLTASLTYLVDGKVYQEERMPANRRYTIA
SLPPGTHVLGVRSTDIYGNTKLAEKQIVVYKPLSIAITSPKEGQRLSPDSEVLGSLEVKS
GSQNLITWRVDNQIVRNSNFLTGNLGKLSAGRHMISASARDLGGNTISAQVQVEVQSDFQ
LNLMGNTGAMEVVLGNPVTCLVGVEKVAGSAVNVSDAAQHIRWFLNNQTTNVSGLSYEFA
ADKAGTFTIQSRYDNEGMQRTSGELTITVRDIVQPTILAPSNGQSLTYSDAKPVELKASG
ESGATFLWKLGDRVVAVGSQAQFNPSGLTGNVQLTLVTTAFSRSRERMVSFTLNKNTSPS
LSLSVPPIQYTTDNLKWSATAFDAEDKLTNQTILYTLDGIPLAANASRLLVANDVGPHTL
SASTIDSMGERTTQSVRFTVAEATLAMSLHSPQEDKSYYRNLEIPLIASPVADEGGSYRW
EIQYLDNPALAKETLGGREAKFVSKAIGKVEITAFYTDVSSRERARKRITVDVQNEPIDL
SINWMHGSLVNAAIPLRPTLVGLPQGAKAESVSWSLNGNPIADIRALTAPTQSGLYTLTA
TYQAEGQRKQASVAFTVNAPPKVTITTLTEGTAYQVGQPIILSAAIEDDQVFSGAVQWTT
ADQKVIGVGNPLIYIPTQTGRTTIQAEATDISQSKGASQVSVSFYEPLKLVDVVVNNGLP
SYLIAEASPPLALKASVEGGIQPKVTWRIRQGNRVLEKEGKETYLLFTELTQLLRENALV
TMILSDSTGDASQAEILRKDFTLAFTSDATLSIISPLSDSVLRVGQDIVMEAALTGFTEP
TFSLTINGSEQKLTWEFGEGRKTVRTTIAPAQFAKEGVYEVVLTAQEPGIKRTSATSLNL
FAGRKGIFLEDVPAIFDKTTDSVVIHATLADLTGVNQVTWMHDLSSEPVASGFSLDLTQA
DLKAGERSITALAYAGGNIVAQTSVRLQVLDRMTLSLLEGTEALILQKGAATSLHAEGFD
RNGEMLEASAFSWRSHLDGVLGTGNTLAFDSLADISEGEHIITAEAVGSDGSTVSVLKPV
QILSSIPTPVEQQVSGGTNIDIPPGSQGPDNEPTPPPPPSNYFQMGMPIDSFMPPNYPPP
FGPGMGGGAPDPGLGGYMDAFFGGGGGFSGGSGGGFSGGAGGGFSGGLGGGFGGGLGGGF
SGGAPGFGM
NT seq
6870 nt
NT seq
+upstream
nt +downstream
nt
ttgacattccgtgtaccggagattccctattacagcgatagcacgattcccaatacctct
acaaccaaactctctatttcgggacctggcgtcaccgaagtcctcaccaagaatcacaac
cgggttacagcttcagccagtgatgcactgaagggatatccgggtgacttgcctaatggg
gaagtcacctatgatttgtccggcattacgttccgagcaggagaaacctactcctttgcc
atcgaattcaaggatgccgcagggtatctggtggacagcaccactacttccatcaaattc
cctactcctaaatttgcaacctcggttgatctttcctctcccttccgcccggaattctcc
tggagtttcaatgacgattacgagtcgtgggtgaaagagtaccgtatttacctcaacggc
caatattatggatacacgaccagcaacagctataccccgaataccctgttagtccccagc
acaacctatacctggcatgtgatgccgataaacaaggacaataccaatttcttcccaagt
acgagcggcattataaaatcgtttaccaccatagcccataccaatctttctatcgatgtt
gaagatcctatcaacaatgccgtgttgtttgtcggccagtcgtacaacttcttggcaact
cctacgttcagcgatgacgccacccaaaaaagtgcacagtggagaattggcacagaaaca
aaaaatgggacaagcatcgcctataccccaacacgtcgctacccggcaaacagccttttg
gcgtatatcaatgttgtggacagcctcaacctcagcaaggactcctccaaactctaccta
accgttcttgaccccgccatagcactccaaggagggacaacccgcaccgttgcccaggat
agctcgcttactctctcactcgatacccaagccagcaaggatttacagaatgtttcctgg
tatttggacaacacggtgataggagaaggaaatagcatcagctacaccttcagtgaaagt
gggaccttcaccctctttgcccgtggaacaagtccggcggacatcaatggcaatacgaaa
actgtgcaatccgcaaaccaaaccatcacggcagtcggaagcggaccggtggttgctatc
accagaccgactaaagaagtggaaatcgtactgggtacttcgctggaccttctttcacag
gtgagcggggataatacgattcagagcacacaatggacatacagcggagctgcttcaggc
tcatttagcacctcttccagccaagcgagctttaatccgacatctgttggagactatacc
ataacccttactgctaccgatatctatcaaaaagctagcagctcatcgttgcgggtattg
gtcatcgatcctcagattgctataacctcaccgctgacacaatctgtacatccacttact
gcaagtcttactccggttatcaacgcgccgaatgctgatcgcgtagtttggtttttcaac
aacaaactaatcaacggctcgacgctggacctctcttcgatcggcatcggaacgtacacc
ttgtatgccagagccttctggaatgtcgtcgatcccttggggaacccaaaggaatacgga
gaaagctccaaccctgtttccattaccatcaaagacttgcaaccaccggtgatcatcctt
acatccccatccgatgggtcaaagctggttgcaggcaaatcatacaccttgtctgcggaa
gtcagttctgcatccccgattaccagtcaatattgggaagtcgatggagcgcggctgaca
ggtactacctatactcctgctgcttcgatacagaaaaaactcgtgaatgcaacctatcat
gctgtaaatcgtgacggggtgagaagtagcaaatccatacaattgcagattgcaaatcct
gctgtctatagtaccaaaccctcggttgcggcctatgtaacaggaagtagaattcctatc
gcagcttcggttgtggacggcgacctgttctggcaaattgacgggattgaagttcctgat
tgggattacaccatcacaaaaacaggcactcataccatccgtgcagggtataaggtggag
gctctgaacccctctggaggacttaccacatttacagggcttgaagccaactccttcaat
ctcacggtgtatagtgagaaacctccggtgataaccacgtttactccggcaacctccctg
atcagtcaggtacagaataagccagtcgtattcatggtaaaaggggcgagcgaaaacacc
ctcatcactccagaatggaccatccactcagctgataccgagatcaggagagtcactgca
gagagcatttcccatcaaagttggggacccgggctctatacggttcgtgcaagcatagcg
gatgcctacggccagaaagttacccaggagtggcgggttcggatcatcaacccgacggtt
gttatcaccaatcccaaatccaacatgcagtttgcaaaaggtcagatacccataccgaca
ctagaaggtgtggatgttgtttcctatgccatgacactcaatggtacggcgatcaccgat
cagttcaattggaactcactggccgtcggccaatacacccttgcggtaagtggcctgtac
aacttgacgggaacaagcgaactgcagcgaacggaaccacagattgttacgttcagggtt
gttgacagaactcccccgaagtttgaggtttcagggcttgtggacaacgaccgattgatt
gcgggccttgcgtacaacttcatggtccgcggtgagactgacgaaactttcacgtggctt
ttggacggcaccgttgtaggtgcaaacgaacgccttgcaatccagttcccgaaaaataaa
aagaatgcggtcttgactgttcgggcgctccgtaacgagattagcgtggataggaacttc
aatgtaaggattctagatccctattacagcattatcatgccgcaaattctgaatacctac
aagttctatccagcaggcactccgctgcccttgatggctgaaagccgggatattgacagg
cttgtgtggatggttgacacgcaactccattcaggttcaaccgtcacccttaatccagga
aaacattccatcgatctgaagggaattgcaacctcggtgcggctgaccgatgggacactc
ggtgagtatgaacccacaaaccaaagcggtatatccggtcgcgatatcgatgttgccacc
atgccctatgttggttcgattactgcacccgacagcgttcaggaaggacagcgcgtcacc
gtcacggcaaatctggtgatgcagcagtccaccgatctgacggcatcgcttacgtatctg
gtcgatgggaaggtgtaccaggaagaacgcatgccggcaaaccgtaggtataccatcgcc
tcactgccgcctggaacccatgtcctgggagttcgctccaccgacatatatgggaacacc
aagctagcagaaaagcagatagtggtctacaaacctctttccatcgctatcacctcaccg
aaagagggacaaaggctgtcacccgatagcgaagtgctgggtagcctcgaggtcaagagc
ggaagtcagaatctcattacctggagagtggacaaccaaatcgtgcggaacagcaatttc
ttgaccgggaatctgggaaaactttcagcaggacgccatatgatttcggccagtgctcgc
gatctgggcggaaatactatatcagctcaagtacaagtggaagtacaaagtgatttccag
ttgaacctgatgggaaatacaggcgcgatggaagtcgtattgggaaatccggttacctgt
ctggtcggagttgaaaaggtagcgggatcagcagtgaatgtcagcgatgcagcacaacac
atccgttggttcctaaataaccaaaccacgaatgtgagcgggctttcctatgaatttgcc
gctgacaaggcaggcacgttcaccatccagagccgctacgacaacgaaggtatgcaacgc
accagcggtgagctgacaataacggtccgtgacattgtgcaacccaccatcctcgctcca
tccaatggacaaagcctgacctactcggatgccaaaccggttgaactcaaagccagcggc
gagagtggggcaacgttcctgtggaagttgggagatcgcgtggtggccgtaggaagccag
gcccaattcaatccaagtggattgacaggcaatgtgcaactcacgttggtcaccactgct
ttctcaagaagcagggagcgtatggtcagcttcacgctgaacaagaatacgagcccaagc
ctaagtttgtcagtgccgccgattcaatacacgactgacaatctgaaatggtcagcaaca
gcgtttgatgcagaagacaaactgacaaaccaaaccatcctgtacacccttgatggaatc
ccgctcgcagccaatgcttcaaggcttttggttgccaacgatgtgggcccgcatacccta
agcgcttccaccatcgattccatgggagaaagaaccacccaaagtgttcgctttaccgtt
gccgaggcaacgcttgccatgagtttgcactcaccgcaagaagacaagagctactacagg
aatttggagattcctctgatagcttcaccggttgccgatgaaggcggttcgtatcgctgg
gaaatccagtatctggataatccggcgcttgcaaaggagacattgggaggcagagaggca
aagtttgtcagcaaggccattggaaaggtggagattaccgccttctacaccgatgtatcc
tcaagggaacgtgcaagaaaacggattaccgtcgatgtacagaatgagccgatcgacctg
agcatcaactggatgcatggaagtctggtaaatgccgcaatacctctacgcccgacactg
gtcggccttcctcaaggagccaaggcagagtcggtaagttggagcctcaacggcaatccc
atcgccgatattcgagccctcacagcaccaacccagagtggactgtataccttgacggct
acctaccaggctgaaggccaacgaaaacaagcctcggttgcctttacggtcaatgcaccg
ccgaaggtcaccattaccacgttgaccgaaggaactgcttatcaggtcggacagcctatc
atcctttcggctgcaatcgaggatgatcaggtgttcagcggtgcagtacagtggaccacc
gcggaccagaaggtgattggagttggaaatcccctcatctatatcccgactcaaaccggt
aggacgacgatacaggcagaagcaaccgatataagccaaagcaagggtgcttcccaggtt
tcagtctccttctacgagccgctgaagctggtcgatgtcgtggtgaacaacggtcttcct
tcctatctcatcgctgaggcttcgcccccattggcactgaaggccagcgttgaaggaggc
atacaacccaaggttacctggcggatcagacagggcaacagggtgctggagaaagaggga
aaggaaacctatctcctgtttaccgagcttacacaactgctcagggaaaatgccctcgtt
accatgatcctttcggacagcaccggggatgcgagtcaagcggaaatcctacgcaaggac
ttcacgctcgctttcacttccgatgccaccctctccattatcagtcctctttccgactcc
gtactgagagtcggtcaggatattgtgatggaggcagcattgacgggtttcacagaaccc
accttctcgcttacgatcaatggatctgagcagaaactcacctgggaatttggagaaggc
agaaagacggtgcgaacaaccattgcccccgctcaatttgccaaggaaggagtctatgaa
gtagtactcactgcccaggaacccggtataaaacgaacctcggctaccagcctgaacctt
tttgccggcaggaagggaatcttcctagaggatgtgccggcaatctttgacaagacaacc
gactcagtggtcattcatgcaaccttggccgatttgacgggagtcaaccaggtcacatgg
atgcatgacctctcctccgaaccggtggcaagtggcttctcgcttgacttgacccaggct
gatctcaaagctggagaacgctcgattaccgccctagcgtatgcaggtggcaatatcgtt
gcccaaacctccgtgaggctgcaggtactcgaccgcatgacgctctccctgcttgaaggg
accgaagcattgatcctccaaaaaggggcggctacaagcttgcacgcagaaggcttcgac
cgtaacggagaaatgctggaagcctcagcctttagctggcgttcccatctcgatggagtg
cttggtacaggaaacactctcgcttttgacagccttgcagacatcagtgagggagagcat
atcatcacagccgaagctgtcggtagtgacggatcgactgtgtctgtgttgaagccggta
caaatactctcttcgattccaacaccagtcgaacaacaagtaagcggaggaacaaatatt
gatattcctccaggatcgcaagggcctgacaacgagccgactcccccgcctcctccatcc
aactatttccaaatggggatgcctattgactccttcatgccgcccaattatccgcctcca
ttcggcccaggtatgggaggaggcgcccctgatccaggacttggagggtatatggacgcg
ttctttggtggtggtggtggttttagtggcggatctggtggtggttttagtggcggagct
ggtggtggttttagtggcggattaggtggtggttttggtggcggattaggtggtggtttt
agcggtggcgcacccggattcgggatgtaa
DBGET
integrated database retrieval system