Staphylococcus carnosus subsp. carnosus: SCA_1105
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Entry
SCA_1105 CDS
T00863
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
sca
Staphylococcus carnosus subsp. carnosus
Brite
KEGG Orthology (KO) [BR:
sca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sca03032
]
SCA_1105 (hup)
03036 Chromosome and associated proteins [BR:
sca03036
]
SCA_1105 (hup)
03400 DNA repair and recombination proteins [BR:
sca03400
]
SCA_1105 (hup)
DNA replication proteins [BR:
sca03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SCA_1105 (hup)
Chromosome and associated proteins [BR:
sca03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SCA_1105 (hup)
DNA repair and recombination proteins [BR:
sca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SCA_1105 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_euk_1
Rpf1_C
Motif
Other DBs
NCBI-ProteinID:
CAL28013
UniProt:
B9DNV7
LinkDB
All DBs
Position
complement(1123661..1123933)
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AA seq
90 aa
AA seq
DB search
MNKTDLINAVAEQAELTKKEAGLAVDAVFESIQSSLSKGEKVQLIGFGNFEVRERAARKG
RNPQTGKEIDIPASKVPAFKAGKALKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagacttaattaacgctgtagcagaacaagctgaattaacaaaaaaagaa
gctggtttagcagttgatgctgtattcgaatcaattcaatcttcattatcaaaaggtgaa
aaagtacaattgattggtttcggtaacttcgaagtacgcgaacgcgctgcccgtaaaggt
cgcaacccgcaaactggtaaagaaattgatattccagctagtaaagttccagcattcaaa
gctggtaaagcattgaaagatgcagttaaataa
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