Shewanella carassii: TUM17387_27600
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Entry
TUM17387_27600 CDS
T07543
Symbol
truC
Name
(GenBank) tRNA pseudouridine(65) synthase TruC
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scaa03016
]
TUM17387_27600 (truC)
Enzymes [BR:
scaa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
TUM17387_27600 (truC)
Transfer RNA biogenesis [BR:
scaa03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
TUM17387_27600 (truC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BCV67401
LinkDB
All DBs
Position
complement(3131006..3131848)
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AA seq
280 aa
AA seq
DB search
MNSLPNKQDETQLQAEISEQSLTHVDEESPEIRILYEDEHLVAIHKPAGLLVHRTYLARK
ERFFAMQLTRDLVGCHVFPVHRLDRPTSGVLLFAKSSEIAAILCQQFAGRETRKEYLALV
RGNMHQAGTLDYPLKEELDAVADKHADRNKEAQDAITQYAPLLNAEIPFPSGRYPSSRFA
LIRLSPQTGRKHQLRRHMAHLRHPIIGDTTHGDGKQNRFFREHFGLNRLWLLAQSLSFTH
PTTGEPVTIVTEPEAEWLQVFEGLGWDESQLESDSGLLLA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaactccttaccaaacaaacaagatgagacccagcttcaagccgagatttcggagcaa
tctttaacgcatgtggatgaagagagccccgagatccgtatcctctatgaagatgaacac
ttggttgccatccataaaccggcgggattactggtgcacagaacctatctggcgcgaaaa
gagcgttttttcgccatgcagctgacccgtgatctggtcggttgtcatgtgtttccggtg
cacaggttggataggccgacctcgggtgtcttgctgttcgccaagagcagtgaaattgcc
gctattttgtgtcagcagtttgccgggcgcgagacacgcaaagagtatctggccctggtg
cgcggcaatatgcaccaagccggtacgctggactatccactcaaagaagaactggatgcc
gtggccgataaacatgccgaccgcaacaaggaagctcaggacgccattactcaatatgcg
ccgctgctcaatgccgagatccctttcccgtcagggcggtaccccagcagtcgttttgcc
ttgatacgtctatcgccgcagactgggcgcaagcatcaactcagaaggcatatggctcat
ctgcgtcaccccatcataggtgacacgacccatggcgatggcaaacaaaaccgtttcttt
cgcgaacacttcggcctcaaccgtttatggttgctggctcagagcttgagcttcactcac
ccaacgacaggcgagcccgtcaccatagtgacagagccggaggccgaatggctgcaagtg
ttcgaaggcctgggctgggacgagtcccagcttgagtcagacagcggtttgctgctggct
tag
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