KEGG   Shewanella carassii: TUM17387_31360
Entry
TUM17387_31360    CDS       T07543                                 
Name
(GenBank) hypothetical protein
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
scaa  Shewanella carassii
Pathway
scaa03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:scaa00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    TUM17387_31360
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:scaa02044]
    TUM17387_31360
Secretion system [BR:scaa02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   TUM17387_31360
SSDB
Motif
Pfam: T6SS_HCP TCAD3
Other DBs
NCBI-ProteinID: BCV67777
LinkDB
Position
complement(3538439..3538957)
AA seq 172 aa
MPTPCYISIEGQTQGNITAGAFTAESVGDIFVEGHEDEMLVQEFNHVVTVPTDPQSGMPS
GQRVHKPFKFTVALNKAVPLMYNSLSSGEKLNKVELKWYRTSIEGKQEHFFTTKLEGATI
VDINCHMPHCQDPNKADFTQLVEVSMAYRKIDWDHVSAGTSGADDWRKPIEA
NT seq 519 nt   +upstreamnt  +downstreamnt
atgccaacaccatgttatatctccatcgaaggtcaaacccagggcaacatcactgcaggt
gcgtttacggccgagtcagtgggcgacatctttgtggaaggtcatgaagacgagatgctg
gttcaggaattcaaccatgtggtgacagtgccgaccgacccacagtcaggtatgccttcg
ggtcaacgggtgcacaagccgttcaagttcaccgtggcgctgaacaaggcggtgcctttg
atgtacaactcgctgtcatccggtgagaagctgaacaaggttgagctgaagtggtaccgc
acctctatcgagggcaagcaggagcacttcttcactaccaagcttgaaggtgcgacgata
gtggacatcaactgccacatgccacactgccaggacccgaacaaggcagatttcactcaa
ttggttgaggtgtcaatggcctatcgcaagatagactgggaccacgtgagtgccggtact
tcaggtgcggatgactggcgcaagcccatcgaagcctga

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