KEGG   Shewanella carassii: TUM17387_35090
Entry
TUM17387_35090    CDS       T07543                                 
Name
(GenBank) type I-F CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
scaa  Shewanella carassii
Brite
KEGG Orthology (KO) [BR:scaa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:scaa02048]
    TUM17387_35090
Enzymes [BR:scaa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TUM17387_35090
Prokaryotic defense system [BR:scaa02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    TUM17387_35090
SSDB
Motif
Pfam: Cas3_I-F_Cas2 DEAD ResIII Cas3_HD
Other DBs
NCBI-ProteinID: BCV68150
LinkDB
Position
complement(3989888..3993292)
AA seq 1134 aa
MMVTFVSQCEKNALKKTRRVLDAFANRIGDNTWQTLITEEGLLTVKKMLRQTASRSTAVS
CHWIRSRSRSQFLWVVGSKKKFNLEGVVPVNSTEKDLLNSDYESDWKYLPLIKALAAMAA
LLHDWGKASLLFQEKLNPEIKTQHKGDPLRHEWISCLLFHQFVTSQMSESHDEAWLNFLI
NQGIDESRLTYQRLQTEKPLSELPNAAALISWLIVSHHRLPLPKKEEMCREQRENCNSSL
GDLLARITSAWGYENQFEDYNRLLPKCFEFPLGLLSQSQTWLTALQRRAKDLLHQLPLLE
QAMNDGSWRVVLHHARLCLMLGDHYYSSQANDPRWKVSTELYANTDPETKERKQKLDEHL
VNVARVAVNTVKLLPFFESEPLKATELTELAPKSSTPKAFRWQDKAVRKIIEWREHTEDK
SQGYFVVNMASTGCGKTMANAKIMQALSEDGESLRFILALGLRTLTLQTGDEYKQRLKLQ
DKDLAVLIGSKAIYELHHQTGAQVDKEEVELNQAELGSESMESLQEETDELHWQRVLPEE
ELTTALIEEELTTVLIKEKDRKLLYAPVLACTIDHIMAATETKRGGRYILPCLRLMSSDL
VIDEIDDFTGDDLIAIGRLVHLAGMLGRKVMISSATIPPDLALGLYNAYRQGWAVFAASR
DRNASINCIYIDEFTAHTQLVGSNDYDLETYQALQQGFINKRVEKLKQQTAKRKAEIIPC
LKQPDLPLDTQYFATVKQAVLAKHRHHFTLDPQSQIQVSFGVVRLANIQPCVELTKYLLS
CDWPADTEVRCMAYHSQQVLLLRHEQEKHLDEVLKRKEAANELPLAFSHSIIRGHLNACS
AKNMIFILVTTPVEEVGRDHDFDWAVIEPSSFRSIIQMAGRVRRHRDGEIPVPNIGLLQY
NLKGFKGREERVFNRPGYETDRTTQLVTHDLTQLVDEKPLLQSVNAVARIQKRATLEPQK
NLADLEHFATAKTCGTDQIGKSEVSEVNRRDRFSRNRRESRPQSCWCEHLHGHIHGYWWL
TALPQYFKRFRKSEPSVQIYLVKKARSIEFCLREDQGGLHPIERTLNIEHLPLPSTQQQK
LWLQRDYSELVSLYSPSPEQEFVTSVRYGEISFIYREGSQQYSYNDQLGLVKVK
NT seq 3405 nt   +upstreamnt  +downstreamnt
atgatggtcacctttgtctctcagtgtgaaaaaaacgcgcttaagaaaacccgtcgcgta
ctggatgctttcgccaaccggattggcgataacacctggcaaaccctgatcaccgaagag
ggattgttaacggtgaaaaaaatgctacgtcaaacagccagccgcagcactgccgtcagt
tgccattggatccgctctcgctcccgcagccagtttttatgggtggtggggagtaaaaag
aaatttaatttggaaggtgtggtgccagttaacagtactgagaaagatttactcaacagc
gactatgaaagtgattggaaatatttgccactgattaaagcgctcgcagctatggccgct
ttgttgcacgattggggtaaggcttctttactgtttcaggaaaaattaaacccagagatt
aaaacccagcataaaggcgacccactgcgccatgagtggatctcttgcctgttatttcat
cagttcgttacaagccagatgagtgagagtcacgatgaagcatggttgaactttctgatc
aaccaaggcattgatgagtcgcgattgacttaccaaaggttacaaacggaaaagccacta
agcgaactgcccaacgcagcagcattgattagttggttaattgtttctcatcacagatta
ccgctgcccaaaaaagaagagatgtgtcgggaacagcgagagaattgtaatagttcgctt
ggtgatttgttggccagaattacttcggcatgggggtatgaaaaccaatttgaggattac
aacaggttgttacccaaatgctttgaatttcctttagggctactttcccaatcacaaact
tggctaacggcattgcaacgccgagctaaggatttattgcatcagttgcctttgttagag
caagcgatgaatgacggtagctggcgcgtggttttacaccatgcacgattgtgcttgatg
ctgggcgaccattattactcttcgcaagccaatgatcctcgttggaaggtttcaaccgag
ctgtacgccaatacagatcccgagaccaaagagcgtaaacaaaagctggatgaacatttg
gttaatgtcgccagggtggcggtgaatacggtgaagttactgcccttttttgaatctgag
ccgctaaaagcgactgaacttaccgagctggcacccaaaagcagcaccccaaaagcgttc
cgttggcaagataaagcggtacgtaaaattatcgagtggcgtgagcatactgaagataaa
agccaaggttattttgtggtcaacatggcgagtactggctgtgggaaaaccatggctaac
gccaaaatcatgcaggcgctctcggaggatggtgaaagtctgcgttttattctcgcgctt
ggtttgcgcactcttactttgcaaaccggcgatgaatacaagcagcggctcaaactgcaa
gataaagatctcgctgtgctcattggctctaaggcgatttacgagttacatcaccagact
ggtgcacaagtcgataaggaggaagtggaacttaatcaagctgagcttggctctgaatcg
atggaaagcttgcaagaagaaactgatgaactgcattggcagcgtgtattgcccgaagaa
gaactcactactgctttaatcgaagaagaactcactacagttttaatcaaggaaaaagat
cgcaaattgctgtatgccccggtactggcttgcaccatagatcatattatggcggctacc
gaaaccaaacggggtgggcgttatatattgccttgcttacggttaatgtcatccgacttg
gtgatagatgaaatcgatgattttactggcgacgatctgattgcgattggcagactcgtt
catttggccggtatgctggggcgcaaagtcatgatttcctctgccactatcccgccggat
ttagcgctcggtttgtacaatgcctatcgccaggggtgggcagtatttgccgccagtcgt
gaccgaaacgccagcattaattgtatttatattgatgaatttacggcacatactcagttg
gtggggagcaatgattatgacttggagacttaccaggccttgcaacaaggctttatcaat
aaacgggtcgagaagctcaaacagcaaaccgccaaacgtaaagccgaaattatcccctgc
ctcaaacaacctgatttaccgcttgatactcagtattttgcaacggtaaagcaagcggtg
ctggccaaacaccggcaccactttaccttagatccccaaagccaaattcaagtttccttt
ggtgtggtgcgccttgccaatattcaaccctgtgtcgagctaaccaagtacttgctcagt
tgtgattggcctgcagataccgaagtacgttgtatggcttatcacagtcagcaagtgctg
ttgctgcgccacgagcaagaaaagcatctagatgaggtgcttaagcgtaaagaagccgcg
aacgaattaccgcttgccttcagccattccattattcgcggtcatttaaatgcctgttct
gcaaaaaatatgatctttattttggtgacgacgcctgtggaagaagtggggcgtgaccat
gactttgattgggcggtgatagagccctcttcttttcgttcgattattcaaatggcaggc
cgtgtacgcaggcaccgtgatggagaaattcctgtgcccaatattggcttgttgcagtac
aacctcaaagggttcaaggggagagaagagcgagtatttaaccgtcctggctatgaaacc
gaccgaactactcagctcgtcactcatgacttaacccagttggtggacgaaaagccattg
ctgcaatcggttaatgcagttgctcgaattcagaagcgagcgacgttggagccacaaaaa
aacttggcggatttagagcactttgccaccgccaaaacatgcggcacggatcaaatcggc
aagtcagaagtaagcgaagttaaccgccgggatagattcagccgcaaccgtcgcgaaagc
cgacctcaatcttgttggtgtgagcatttacacggtcatattcatggctactggtggctt
acggcattgccgcaatacttcaaacgctttcgtaaaagtgaaccctcagtgcaaatctac
ttagttaaaaaagcgcgcagcattgagttttgtttgcgtgaagatcagggcggcttacac
ccgattgaacgcaccttgaatattgaacatctaccgcttccatcaacccaacaacagaag
ctttggctacagcgtgattacagtgagttagtcagtttatacagtccaagccctgagcag
gagtttgtcacgtcagtacgatacggagaaatcagttttatctaccgggaaggaagtcag
caatacagttacaacgaccaattaggcttggttaaggtcaaatag

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