Sphingomonas cannabina: LZK98_06425
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Entry
LZK98_06425 CDS
T08607
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00470
D-Amino acid metabolism
scab01100
Metabolic pathways
scab01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LZK98_06425 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LZK98_06425 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scab01011
]
LZK98_06425 (alr)
Enzymes [BR:
scab01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
LZK98_06425 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
scab01011
]
Precursor biosynthesis
Racemase
LZK98_06425 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
UIJ46579
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All DBs
Position
1324113..1325144
Genome browser
AA seq
343 aa
AA seq
DB search
MTPSAPHRLILDGSALVHNWRLLARMSGSAACGAAVKADAYGLGAGEVVPRLAEAGCRDF
FVATWAEALALAGQEVSIAVLHGVRAEDMELAGLPNTRPVLSTAEQVKRWREGGGGMCDV
MVDTGMNRLGLSVEEVTGGLLDGLAVDVLMSHLACADEDSPMNARQQAALAELKGRTNAR
RLSLANSAGIALGTDYAFDLTRPGLALYGGVPRAELSGVRQVVFPEAQILQRRRVPAGGT
VGYNATWTAPEETEVAVINLGYADGYWRGFSGRGIAQAGGKRLPVLGRVSMDLAALDVDA
APELGEGDWVTIDYALPAAAEASGMSQYELLTGLGKRFERVMR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgactccgtccgccccgcatcgcctgatcctcgacggttccgccctggtccacaactgg
cggctgctcgcccggatgagcggcagcgcggcgtgcggagcggcggtgaaggccgatgcc
tatggcctgggcgcgggcgaggtcgtcccacggctggcggaggcagggtgccgggatttc
ttcgtcgcgacctgggcggaggcgctggcgctcgcggggcaggaggtatcgatcgcggtg
ctccacggcgtgcgcgcggaggacatggaactcgccggcctgccgaatacgcgcccggtg
ctcagcacggccgagcaggtgaaacgctggcgcgaaggcggcgggggcatgtgcgacgtg
atggtcgacaccggcatgaaccggctcggcctgtcggtggaggaggtgacgggcgggttg
ctcgacggcctcgctgtcgacgtgctgatgagccatctcgcctgcgccgacgaggattcg
ccgatgaacgcgcgccagcaggccgcgctggctgagctcaagggacggaccaatgcgcgg
cggctgagcctcgcgaactcggcggggattgcgctcggcaccgactatgcgttcgacctg
actcggccggggctggcgctctacggcggcgtgccgcgggcggagctgagcggggtgcgg
caggtcgtttttcccgaggcacagatcctccagcgccgccgcgtgccggcgggcggcacg
gtcggctacaatgccacttggaccgcgccggaggagaccgaggtggcggtgatcaatctt
ggctatgccgatggctattggcgcggcttctccggtcgcggcatcgcgcaggcgggcggg
aagcggctgccggtgctgggacgcgtgtcgatggatttggcggcgctcgacgtcgacgca
gcgccggagctcggcgagggggattgggtgacgatcgattatgccctgccggcggcggca
gaggcctcgggcatgtcgcagtatgagctactgacgggcctggggaagcgcttcgagcgg
gtgatgcgctag
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