Sphingomonas cannabina: LZK98_10735
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Entry
LZK98_10735 CDS
T08607
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scab03021
]
LZK98_10735 (rpoH)
Transcription machinery [BR:
scab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LZK98_10735 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r3
ARA70
DUF1870
Motif
Other DBs
NCBI-ProteinID:
UIJ43574
LinkDB
All DBs
Position
complement(2287929..2288831)
Genome browser
AA seq
300 aa
AA seq
DB search
MASATNVPATIPALGGEASLNRYLAEIKKFPILAPEQEYMLAKRFQEHGDPEAAAQLVTS
HLRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFEPDRGFRLATYAMWWIRASIQEF
ILRSWSLVKMGTTAAQKKLFFNLRRMKSKLDAFEEGDLSPEHVAKIAKDLGVTEEEVNSM
NRRMAMGGDTSLNVPMREDGEGQWQDWLADDSPLQDSVVAEAQEADVRHDMLVEAMDDLN
DREKHILTERRLTDDPKTLEELSQVYGVSRERVRQIEVRAFEKLQKAMMRLAGEKRLLAA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgcaaccaacgtccccgcgacgatccccgcgctcggcggagaggcgagcctc
aaccgctatctcgccgagatcaagaagttcccgatcctcgcgcccgagcaggaatatatg
ctcgccaagcgcttccaggagcatggcgatcccgaggccgcggcgcagctcgtgacctcg
cacctgcgcctcgtcgcgaagatcgcgatgggttatcgcggctacggcctgcccgtctcg
gagctcatctccgaaggcaacatcggcctgatgcagggcgtcaagaagttcgagcccgat
cggggcttccgcctcgctacctatgcgatgtggtggatccgcgcctcgatccaggaattc
atcctgcgttcctggtcgctggtgaagatgggcaccaccgccgcgcagaagaagttgttc
ttcaacctccggcggatgaagtcgaagctcgacgccttcgaggagggcgacctttccccc
gaacacgtcgccaagatcgccaaggatctgggcgtgaccgaggaggaggtcaactcgatg
aaccgccgcatggcgatgggcggcgacacgtcgctcaacgtgcctatgcgcgaggacggc
gaaggccagtggcaggattggctcgccgacgattcgcccttgcaggactcggtagtcgcc
gaggcgcaggaagcggatgtccgtcacgacatgctggtcgaggcgatggacgacctcaac
gaccgcgagaagcacatcctcaccgagcgtcgcctgaccgacgatcccaagacgctcgag
gagctgagccaggtctacggcgtcagccgcgagcgcgtccgccagatcgaggtgcgcgcg
ttcgagaagctgcagaaggcgatgatgcgcctcgccggcgaaaagcggctgttggcggcg
taa
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