Sphingomonas cannabina: LZK98_10740
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Entry
LZK98_10740 CDS
T08607
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scab03009
]
LZK98_10740
Enzymes [BR:
scab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LZK98_10740
Ribosome biogenesis [BR:
scab03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LZK98_10740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UIJ43575
LinkDB
All DBs
Position
complement(2288893..2289843)
Genome browser
AA seq
316 aa
AA seq
DB search
MDRGVSIIEARIAGSADGWRLDRALADAVPTLSRERLKALISSGQVVGPDGPARDPARKA
LAGAEFRITVPVPRPAHNEAQDIALDVVFEDEHLIVVDKQAGLVVHPAAGNLDGTLVNAL
LHHCGGSLSGIGGVARPGIVHRIDKDTSGLMVAAKTDRAHEGLARQFRAHSVQRRYKAIV
SGVPSPQGKVDAPIARSVNNRKKMSLVAEGKGKHAVTHWRLLKPLFHAALVECRLETGRT
HQVRVHMASIGHPLLGDPVYGRTKTEHRALLETLNFRRQALHAAHLGFIHPVTSTALAFD
SEMPADMQELFTELVV
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggaccggggggtttccatcatcgaagcgcggattgctggctcggccgacggctggagg
ctcgatcgtgcgctggcggatgcggtgcccaccctctcccgcgaacgattgaaggcgctg
atctcgtccggccaggtcgtcggccccgatggccctgcccgtgatccggcacgcaaggcg
ctggccggcgcggagtttcgcatcaccgtgccggtgcccaggccggcgcacaacgaggcg
caggacatcgcgctcgacgtggtgttcgaggacgagcatctcatcgtcgtcgacaagcag
gccgggctggtcgtgcatcccgccgcgggcaacctcgacggcacgctggtcaacgcgctg
ctccaccattgcggcggctcgctctccggcatcggcggggttgcgcggccggggatcgtc
caccgcatcgacaaggacacgtccgggctgatggtcgccgccaagaccgaccgcgcccac
gaaggtctcgcgcgtcaattcagggcgcacagcgtccagcgccgctacaaggcgatcgtg
tccggcgtgccgtctccccaggggaaagtggacgcgccgatcgcgcgaagtgtcaacaac
cgaaagaagatgtccctcgttgccgaggggaaagggaaacatgcggtcacccattggcgc
ctcctgaaacccctgttccacgccgctctcgtcgaatgccgactggagaccggccgcacc
catcaggtgcgcgtccacatggcctcgatcggccatccgctgctcggcgatcccgtctat
ggacgaaccaaaaccgagcatcgcgcgttattggaaacgctgaatttccgacgtcaggcg
ttgcatgcggctcatctcgggttcattcatcccgtgacaagcaccgctttggcgttcgat
agcgaaatgcctgcagacatgcaggaactgttcaccgaacttgtcgtatag
DBGET
integrated database retrieval system
