Sphingomonas cannabina: LZK98_13510
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Entry
LZK98_13510 CDS
T08607
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scab03400
]
LZK98_13510 (radA)
DNA repair and recombination proteins [BR:
scab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LZK98_13510 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Rubredoxin_2
ChlI
DnaB_C
Lon_C
AAA_16
AAA_22
RecA
AAA
Glyco_hydro2_C5
AAA_5
NACHT
nSTAND3
NTPase_1
AAA_30
AAA_29
AAA_14
ATPase_2
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
UIJ44091
LinkDB
All DBs
Position
complement(2820915..2822288)
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AA seq
457 aa
AA seq
DB search
MAKPQKRYVCQLCGSVSSKWAGQCADCGEWNTLVEDAGAVVTPFQARHNLQSGGRAIEMS
GLDAAIPLPERMATGIAELDRALGGGFVEASATLIGGDPGIGKSTLLLQAAARLALAGRA
VAYVSGEEAADQVRLRAQRLGLGRAPVRLAAATSVRDILTTLGEGAAPALLVIDSIQTMH
SDLIEGAPGTVSQVRASAQELIRFAKERGTALVLVGHVTKDGTIAGPRVLEHMVDTVLAF
EGERSHQYRILRATKNRFGGTDEIGVFAMEAGGLSEIANPSSLFLTARDETVAGTVVFPA
LEGTRPVLVEVQALTVRLASGATPRRAVVGWDSGRLAMILAVLEARCGLSLSSCEVYLNI
AGGYRVQDPAADLAVAAALVSALSERPIEADAVAFGEIALSGEVRPVAHGALRLKEAAKL
GFGRALVPAKQGSEGAAVEVASFGNLGRFVDHLLGRG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaccccagaagcgctacgtctgccagctgtgcggatcggtctcgtccaaatgg
gccgggcaatgcgcggattgcggagagtggaacacgctggtcgaggatgcaggcgcggtg
gtgacgccgttccaggcgcgccacaacctgcagtcgggcgggcgcgcgatcgagatgagc
gggctcgacgccgcgattcccttgcccgagcggatggcaaccgggatcgccgagctcgac
cgggcgctgggcgggggcttcgtcgaagcgtcggcgacgctgatcggcggcgatccgggg
atcggcaaatcgacgctgttgttgcaggcggcggcgcggctggcgctcgcagggcgtgcg
gttgcctatgtgtcgggcgaggaggcggcggatcaggtgcgcctgagggcccagcggctg
gggctcgggcgcgcgccggtgcggctcgcggcggcgacgtcggtgcgcgacatcctgacg
acgctgggagagggcgcggcgccggcgctgctggtgatcgattcgatccagacgatgcat
tccgacctgatcgaaggcgcgccggggacggtgagccaggtgcgcgcctccgcccaggag
ctgatccgcttcgccaaggagcgggggacggcgctggtgctggtcgggcatgtcaccaag
gacggcacgattgcgggcccgcgcgtgctggagcacatggtcgataccgtgctcgccttc
gaaggcgagcgcagccaccagtatcgcatcctgcgtgcgaccaagaaccgcttcggtggc
actgacgagatcggcgtgttcgcgatggaagcgggcgggctcagcgagatcgccaatccc
tccagcctgttcctcaccgcgcgtgacgagacggtggcggggacggtggtgtttccggcg
ctggaggggacgcggccggtgctggtcgaggtgcaggcgctgacggtacggctcgcctcc
ggcgcgacgccgcggcgggcggtggtcggctgggattcgggacggctggcgatgatcctg
gcggtgctggaggcgcggtgcgggctcagcctctcgtcatgcgaggtctatctcaacatc
gcgggcgggtatcgcgtgcaggacccggcggcggacctggcggtggcggcggcgctggtc
tccgccttgagcgagcggccgatcgaggccgacgcggtggcgttcggcgagatcgcgttg
tcgggcgaggtgcggccggtggcgcatggcgcgctcaggctcaaggaggccgcgaagctg
ggattcggccgggcgctggtgccggccaagcagggaagcgaaggcgcggcggtggaggtc
gcgagcttcggcaacctcgggcggttcgttgaccatctgctggggcggggatag
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