Streptomyces californicus: I6J39_17220
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Entry
I6J39_17220 CDS
T07611
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
scal
Streptomyces californicus
Pathway
scal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6J39_17220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scal03019
]
I6J39_17220
Enzymes [BR:
scal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
I6J39_17220
Messenger RNA biogenesis [BR:
scal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
I6J39_17220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
TPR_11
Motif
Other DBs
NCBI-ProteinID:
QRV28861
LinkDB
All DBs
Position
3928439..3929881
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AA seq
480 aa
AA seq
DB search
MPNANEENASALNHVQHHAVSELLRVSPVADDLARRFQQAGFGLALVGGSVRDALLGRLG
NDLDFTTDARPEDVLKIVRPWADSVWEVGIAFGTVGSQKDGYQIEITTYRSEAYDRTSRK
PEVSYGDSIEDDLVRRDFTVNAMAVALPGTEFVDPYGGRDDLAARVLRTPGTPEASFSDD
PLRMLRAARFAAQLDFEVAPDVLSAMTEMAARIEIVSAERVRDELNKLLLSRHPRKGLGI
LVDTGLAAHVLPELPALRLESDEHHRHKDVYEHSLTVLEQAIDLEQDGPDLVLRLAALLH
DIGKPRTRRFEKDGRVSFHHHEVVGAKMTKKRMLALKYSNELVKDVSRLVELHLRFHGYG
DGEWTDSAVRRYVRDAGPLLERLHKLTRSDCTTRNKRKANALSRTYDGLEERIALLQEQE
ELDSIRPDLDGNEIMQILEVGPGPVIGKAYGFLLELRLENGPMERDDAVAALKEWWAQQG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaacgccaacgaagagaacgccagtgcactgaaccatgtgcagcaccatgcggtg
agtgagctgctgagggtgtccccggtagccgacgacctcgcccgccgattccagcaggcc
ggattcggtctcgcgctggtcggtgggtcggttcgcgacgcattgctgggccggctcgga
aacgacctggacttcaccaccgacgcccgcccggaggacgtactcaagatcgtccgtccg
tgggccgactcggtgtgggaggtcggaatcgccttcggcaccgtcggctcccagaaggac
ggctaccagatcgagatcacgacctatcggtcggaggcgtacgaccggacctcgcgcaag
ccggaggtctcctacggcgactccatcgaggacgacctcgtgcgccgcgacttcacggtc
aacgcgatggccgtggcgctgccggggacggagttcgtcgatccgtacggagggcgggac
gacctcgccgcccgtgtcctgcgtacccccggcacgcctgaggcgtccttctccgacgat
ccgctgcggatgctgcgcgctgcccggttcgccgcccaactcgacttcgaggtcgccccc
gacgtcctctccgcgatgacggagatggccgcgcggatcgagatcgtctccgccgagcgg
gtccgcgacgaactgaacaaactgctgctctcccggcatccgcgcaagggcctggggatc
ctggtcgacaccggactggcggcccacgtgctgccggagcttcccgcgctgcggctggag
agtgacgagcatcaccggcacaaggacgtctacgagcactcgctgaccgtcctggagcag
gccatcgatctggagcaggacgggcccgacctcgtcctgcgcctggccgcgctcctccat
gacatcggcaagccccggacccgccgcttcgagaaggacggccgtgtctccttccaccac
cacgaagtggtgggcgcgaagatgaccaagaagcgcatgctcgcgctcaagtactccaac
gagctggtcaaggacgtgtcgagactggtggagctgcacttgcggttccacggatacggg
gacggggagtggaccgactccgcggtacgccggtatgtgcgtgacgccgggccactgctc
gaacgtctccacaagctgacccggtcggactgcacgacccggaacaagcgcaaggccaac
gcgctctcccgcacgtatgacggtctggaggagcgcatcgccctgctccaggagcaggag
gagctcgactcgatccgccccgacctggacggcaacgagatcatgcagatcctggaggtc
ggtcccggcccggtgatcggcaaggcgtacgggttcctgctggagctgaggctggagaac
gggcccatggagcgggacgacgcggtcgccgcgctcaaggagtggtgggcgcagcagggc
tga
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