Staphylococcus capitis subsp. capitis: AYP1020_0833
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Entry
AYP1020_0833 CDS
T03970
Symbol
gcvPB
Name
(GenBank) putative glycine dehydrogenase [decarboxylating] subunit 2
KO
K00283
glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:
1.4.4.2
]
Organism
scap
Staphylococcus capitis subsp. capitis
Pathway
scap00260
Glycine, serine and threonine metabolism
scap00630
Glyoxylate and dicarboxylate metabolism
scap00785
Lipoic acid metabolism
scap01100
Metabolic pathways
scap01110
Biosynthesis of secondary metabolites
scap01200
Carbon metabolism
Module
scap_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
scap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AYP1020_0833 (gcvPB)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AYP1020_0833 (gcvPB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AYP1020_0833 (gcvPB)
Enzymes [BR:
scap01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
AYP1020_0833 (gcvPB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GcvP2_C
GDC-P
Aminotran_5
Beta_elim_lyase
DegT_DnrJ_EryC1
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
AKL91979
LinkDB
All DBs
Position
complement(872984..874468)
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AA seq
494 aa
AA seq
DB search
MVSKSSPLIFERSKKGRYAYSLPQSDIEDITISSVLDDKYIRKDKAEFPEVAELDLVRHY
TELSNKNFGVDTGFYPLGSCTMKYNPKVNEKVARIPGFSESHPLQEEEHIQGSLEIIYSL
QEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGQGHRDEVIVPDSAHGTNPASA
SFAGFKSVTVKSNERGEVDIDDLRRVVNENTAAIMLTNPNTLGIFEKNIMEIREIVHEAG
GLLYYDGANLNAIMDKVRPGDMGFDAVHLNLHKTFTGPHGGGGPGSGPVGVVKELSSYLP
KPMVIKDGEFYKYDNNIENSIGRVKPFYGNFGIYLRAYTYIRTMGAEGLKEVSEAAVLNA
NYIKARLKDHFEIPYDQYCKHEFVLSGTKQKQFGVRTLDMAKRLLDFGVHPPTIYFPLNV
EEGMMIEPTETESKETLDHFVDSLIQISNEAKDNPDVVLEAPHTTIIDRLDETTAARKPI
LKFEDLKQEKTIEH
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggttagtaaatcaagtccattaatctttgaaagatccaaaaaaggtagatatgcgtat
tctttacctcaaagtgatattgaggacattacaatttcctctgtattagatgacaaatat
attcgtaaagataaagccgagtttcctgaggtagctgaactagatttagttcgacattac
acagaactctccaataaaaattttggtgtagacactggtttttatccattgggatcatgc
acgatgaaatataatcctaaagttaatgaaaaagttgctagaatacctggatttagtgaa
tctcatccattgcaagaggaagaacacattcaaggttcacttgaaattatttatagtttg
caagaagagctaaaagaaattacaggtatggatgaagtaacacttcaaccagcagcaggc
gcgcacggtgaatggacagctctcatgattttcaaagcttatcatgagaataatggacaa
ggacatagagatgaggttattgtacctgattctgctcacggtacaaaccctgcttcagcc
tcatttgccggatttaaatcagtcactgttaaatctaatgagcgcggagaagtagatatt
gatgatttaagaagagttgtaaatgagaatacagctgctatcatgctaactaatccaaat
acattaggtatatttgagaagaatattatggaaattagagaaatcgttcatgaagctggt
ggtctactttattacgatggcgcaaatttaaacgcaataatggataaagttagacctgga
gatatgggctttgatgcagttcatctgaacttacacaaaacgtttactggacctcatggt
ggcggtggccctggttcaggaccagtaggtgtggtaaaagagttatctagctacttacct
aagccgatggtcattaaagatggcgagttctataagtatgataataacattgaaaactca
attggaagagttaaaccattctatggtaactttggtatttatttaagagcctatacgtat
attagaactatgggtgctgaaggacttaaagaagtttcagaggctgctgtgctgaatgct
aattatattaaagcacgtctaaaagatcattttgaaatcccatatgaccaatattgtaaa
catgagtttgttttgagcggaacgaaacaaaaacaatttggcgtccgtacattagatatg
gcaaaaagacttttagattttggagttcatcctccaactatttatttcccacttaatgtt
gaagagggaatgatgatcgaacctacagaaactgaatctaaagaaacattagatcatttc
gtagattcactaatacaaatttctaatgaagcgaaagataatcctgatgtagtgcttgaa
gcaccgcacacaaccattatagatagattagacgaaacaactgcagcacgtaagccaatt
cttaaattcgaagatttaaaacaagaaaaaacaattgaacattaa
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