Staphylococcus caprae: DWB96_07920
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Entry
DWB96_07920 CDS
T06252
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
scar
Staphylococcus caprae
Brite
KEGG Orthology (KO) [BR:
scar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scar03016
]
DWB96_07920
Enzymes [BR:
scar01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
DWB96_07920
Transfer RNA biogenesis [BR:
scar03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
DWB96_07920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QDW94143
LinkDB
All DBs
Position
complement(1659328..1660872)
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AA seq
514 aa
AA seq
DB search
MNEEQRKAGTINILAERDRKAEKDYSKYFEQVYQPPSLKEAKKRGKQEVQYNRDFHIDEK
YKGMGNGRTFLIKTYGCQMNAHDTEVMAGILKALGYSATSDINQADVILINTCAIRENAE
NKVFSEIGNLKHLKKERPECLIGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPEI
LEEAYLSKAMVVEVWSKEGDVIENLPKVREGSIKAWVNIMYGCDKFCTYCIVPFTRGKER
SRRPEDIINEVRELAREGYQEITLLGQNVNSYGKDIEGLDYGLGDLLEDISKIDIPRVRF
TTSHPWDFTDRMIEVIANGGNIVPHIHLPVQSGNNAVLKIMGRKYTRESYLDLVSRIKNA
IPDIALTTDIIVGYPNETEEQFEETLSLYDEVEFEHAYTYLYSQRDGTPAAKMKDNVPTE
VKKERLQRLNKKVGEYSQKAMSQYEGEIVTVLCEGSSKKDDTVLAGYTAKNKLVNFKAPK
EMIGKLVDVKIDEAKQYSLNGTFVGEHQSEMVVQ
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgaagaacaaagaaaagctggtacgataaatattttagctgaacgtgatcgcaaa
gctgaaaaagactatagcaaatactttgaacaagtgtatcaaccgccaagtttgaaagaa
gcaaagaaacgtgggaaacaagaagtacaatataacagagatttccacattgatgaaaaa
tataaaggtatgggtaacggacgaacatttttaattaaaacgtatggttgccaaatgaat
gcacatgataccgaagtcatggcggggatattgaaagctttaggttatagtgcgacttca
gatattaatcaagctgacgttatattaattaatacttgtgcgattcgtgaaaatgcagaa
aacaaagtgtttagtgagattgggaatttaaaacatcttaaaaaagaacgccctgagtgc
ctaattggcgtttgtggttgtatgtctcaagaagaatccgtagtgaataagattttgaaa
tcttatcaaaatgtagatatgatttttggtacacataatattcatcatttgcctgaaatt
ttagaagaagcttatctatcaaaagctatggtagttgaagtgtggtctaaagagggcgat
gtaattgaaaacttacctaaagtacgtgaaggtagcatcaaagcttgggtgaatatcatg
tatggttgcgataaattctgtacatattgtattgttccatttacaagaggtaaggaacgt
agtcgtcgtcctgaagatattattaatgaagtgagagaattagctagggaaggttatcaa
gaaatcactttactaggacaaaacgttaactcttatggtaaagatattgaaggattagat
tatggtttgggtgacttattagaggacatctctaaaattgatattcctagagtacgtttt
actacaagccatccttgggactttacagatcgcatgattgaagtcattgctaatggtggt
aatatcgttccacatattcacttgccagttcaatctggtaataacgctgttttaaaaatt
atgggacgcaaatatactagagaaagttatcttgacttagtaagtagaataaaaaatgct
attcctgatattgctctaaccacagatatcatcgtaggttatccaaatgaaacagaagaa
caatttgaagaaacattatcactatatgatgaagttgaatttgaacatgcatatacttat
ctgtattcacaaagagacggtacaccagctgcaaaaatgaaagataacgttccaactgaa
gttaaaaaggaacgtctacaaagattaaataaaaaagttggagagtactctcaaaaagca
atgagccaatatgaaggtgaaattgtcacagtactatgtgaaggttcaagtaaaaaagat
gatactgtattagctggatacactgctaagaataaactagtaaactttaaagctccaaaa
gaaatgattggaaaacttgttgatgtgaaaattgatgaagccaaacagtactcattaaat
ggaacttttgttggagaacatcaaagtgagatggtggttcaatag
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