Streptomyces cavourensis: CVT27_16390
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Entry
CVT27_16390 CDS
T07023
Name
(GenBank) RNA polymerase sigma factor SigM
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
scav
Streptomyces cavourensis
Brite
KEGG Orthology (KO) [BR:
scav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scav03021
]
CVT27_16390
Transcription machinery [BR:
scav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CVT27_16390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_16
Herpes_TAF50
Motif
Other DBs
NCBI-ProteinID:
ATY96867
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Position
complement(3735645..3736361)
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AA seq
238 aa
AA seq
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MDSVPPEAPSDSDLLARHVAGDPDAFSELVRRHRDRLWAVALRTLRDREEAADAVQDALV
SAFRAAHTFRGQSAVTTWLHRITVNACLDRVRKAASRKTSPVDDADRLDQLLEPHESAEA
PAERQDLHRQLFAALATLPAEQRAALVLVDMQGYPVAEAASILDVPTGTVKSRCARGRAR
LAPLVRHLRGGNGSEDPDGKAPDTGRNRTPGPSVPPASGPQDTEANDPAAAKGGGGRP
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
gtggattccgttccaccagaggcaccgagcgactcggacctgctcgcccgccatgtggcg
ggcgaccccgacgccttcagtgaactcgtacgccgccaccgcgaccggctgtgggccgtg
gcgctgcgcactctcagggaccgggaggaagcggccgacgccgtccaggacgccctggtc
tccgccttccgggccgcccacaccttccgcggccagtccgccgtcaccacctggctgcac
cgcatcaccgtcaacgcctgcctcgaccgggtccgcaaggccgcttcccgcaagacgtcc
ccggtggacgacgcggaccggctcgaccagctcctggagccgcacgagtcggccgaggcc
cccgccgaacggcaggatctccaccgccagctcttcgccgccctggccaccctccccgcc
gaacagcgcgcggccctcgtcctggtcgacatgcagggctaccccgtggccgaggccgcc
agcatcctggacgtgccgaccgggaccgtgaagagccggtgcgcccgggggcgggcgaga
ctggcccccctggtccggcacctgcgcggtgggaacgggagcgaggaccctgacgggaag
gccccggacaccggaaggaaccggacgcccggtccatccgtcccaccggcgtcaggacct
caggacacggaagcgaacgacccggccgctgcgaagggaggaggtggacgcccgtga
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