Saccharomyces cerevisiae (budding yeast): YGR109W-B
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Entry
YGR109W-B CDS
T00005
Name
(RefSeq) gag-pol fusion protein
KO
K07497
putative transposase
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
YGR109W-B
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_A2B
Ty3_capsid
RVT_1
RT_RNaseH_2
RT_RNaseH
Integrase_H2C2
rve
Retrotrans_gag
Asp_protease
gag-asp_proteas
Asp_protease_2
RVP_2
zf-H2C2
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
853006
NCBI-ProteinID:
NP_011624
SGD:
S000007347
UniProt:
Q99315
Structure
PDB
LinkDB
All DBs
Position
VII:join(707610..708459,708461..712254)
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AA seq
1547 aa
AA seq
DB search
MSFMDQIPGGGNYPKLPVECLPNFPIQPSLTFRGRNDSHKLKNFISEIMLNMSMISWPND
ASRIVYCRRHLLNPAAQWANDFVQEQGILEITFDTFIQGLYQHFYKPPDINKIFNAITQL
SEAKLGIERLNQRFRKIWDRMPPDFMTEKAAIMTYTRLLTKETYNIVRMHKPETLKDAME
EAYQTTALTERFFPGFELDADGDTIIGATTHLQEEYDSDYDSEDNLTQNGYVHTVRTRRS
YNKPMSNHRNRRNNNPSREECIKNRLCFYCKKEGHRLNECRARRRVLTDLELESKDQQTP
FIKTLPIVHYIAIPEMDNTAEKTIKIQNTKVKTLFDSGSPTSFIRRDIVELLKYEIYETP
PLRFRGFVATKSAVTSEAVTIDLKINDLHITLAAYILDNMDYQLLIGNPILRRYPKILHT
VLNTRESPDSLKPKTYRSETVNNVRTYSAGNRGNPRNIKLSFAPTILEATDPKSAGNRGD
SRTKTLSLATTTPAAIDPLTTLDNPGSTQSTFAQFPIPEEASILEEDGKYSNVVSTIQSV
EPNATDHSNKDTFCTLPVWLQQKYREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQ
PYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATI
SDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPF
GLVNAPSTFARYMADTFRDLRFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKK
KKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPN
CSKIAQPIQLFICDKSQWTEKQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIG
AVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRT
DHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAVYTITPETSRP
IDTESWKSYYKSDPLCSAVLIHMKELTQHNVTPEDMSAFRSYQKKLELSETFRKNYSLED
EMIYYQDRLVVPIKQQNAVMRLYHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSIIQYIR
TCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKR
AHFIATRKTLDATQLIDLLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMS
SANHPQTDGQSERTIQTLNRLLRAYASTNIQNWHVYLPQIEFVYNSTPTRTLGKSPFEID
LGYLPNTPAIKSDDEVNARSFTAVELAKHLKALTIQTKEQLEHAQIEMETNNNQRRKPLL
LNIGDHVLVHRDAYFKKGAYMKVQQIYVGPFRVVKKINDNAYELDLNSHKKKHRVINVQF
LKKFVYRPDAYPKNKPISSTERIKRAHEVTALIGIDTTHKTYLCHMQDVDPTLSVEYSEA
EFCQIPERTRRSILANFRQLYETQDNPEREEDVVSQNEICQYDNTSP
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atgagctttatggatcaaatcccaggaggaggaaattatccaaaactcccagtagaatgc
cttcctaacttcccgatccaaccatctttgaccttcagaggtagaaatgactcgcataaa
ctgaaaaactttatctccgaaataatgttaaacatgtctatgatatcttggccgaatgat
gccagtcgtattgtgtactgcagaagacatttattaaaccccgctgctcagtgggctaat
gactttgtacaagaacaaggtatacttgaaataacattcgacacattcatacaaggatta
tatcagcatttctataagccaccagatatcaataaaatctttaatgcaatcacgcaactt
tccgaagctaaacttggtattgagcgtctcaaccaacgattcagaaagatttgggacaga
atgccaccagacttcatgaccgaaaaagctgccataatgacatatactaggctattgaca
aaggaaacctataatattgtcagaatgcacaaaccagagacattaaaagacgccatggaa
gaggcttaccagacaactgcactaactgaaagattcttcccaggattcgaacttgatgct
gatggagacactatcatcggtgccacaacccacttacaagaagaatacgactctgactat
gattcagaagataatctgacccagaatggatacgtccataccgtaaggacaagaagatct
tacaataaaccaatgtcaaatcatcgaaacaggagaaataacaacccatctagagaagaa
tgtataaaaaatcggctatgcttctattgtaagaaagagggacatcgcctgaacgaatgt
agagcacgtaggcgagttctaaccgatcttgaactcgaatcaaaagaccaacaaactcct
tttatcaaaaccttaccaattgtacactatatcgccatccccgagatggacaataccgcc
gaaaaaaccataaaaatacaaaacacgaaagtaaaaaccctgtttgacagtggatcaccc
acgtcatttatccgaagagatattgtagaacttctcaaatacgaaatctacgagacccct
ccactccgttttagaggattcgtagccaccaaatccgccgttacatccgaagcagtcacc
attgacctcaaaatcaatgacctgcatataactttagccgcgtacatactggataacatg
gactaccaattgttaattggaaatccaatcttacgccgctacccgaaaatcctgcacaca
gtactgaataccagagagagccccgactccttaaagcccaagacttatcgctccgaaacc
gttaataacgttagaacctactccgctggtaatcgtggtaaccccagaaacataaaactg
tcttttgcccccaccattctcgaagcaactgacccgaaatccgctggtaatcgtggtgac
tccagaaccaaaaccctgtctcttgcaaccactactcctgcagcaattgacccgcttacg
acccttgataacccaggtagtactcaaagtacatttgcgcaattcccgatacctgaagaa
gcgagcatcctagaagaggatggaaaatactccaacgttgtctcaaccattcagagtgta
gaacctaatgctactgatcacagcaataaggacaccttttgcactttgccagtttggtta
caacagaagtatagagagatcatacgtaatgatctcccaccaagacctgccgacattaat
aacatccccgtaaaacatgatattgaaattaaacctggcgcaagactacctcgactacag
ccataccatgttacagaaaagaacgaacaagaaatcaacaaaatagttcaaaaactgctc
gataacaagttcattgttccctcaaagtcgccttgcagctcccctgtagtcctcgtcccg
aagaaagacggtaccttccgactctgcgtcgattaccgcaccctgaacaaagctaccatc
tccgacccattcccattacccagaatcgacaacctattgagccgtattggaaatgcccag
atatttaccacgctagatttgcatagtggttaccaccagatcccgatggaacccaaagac
cgctacaaaaccgcctttgtcacaccatccggtaagtatgaatataccgtcatgccattt
ggcttagtcaatgcacctagtacattcgcaagatacatggctgatacatttagagacctg
agattcgtcaatgtttaccttgatgatatattaatattctccgaatctccagaagaacat
tggaaacatttagacacggtactagaaagattaaagaacgagaacctcattgttaagaag
aaaaaatgtaaatttgcatctgaagaaactgagtttttaggctatagtattggaatccag
aaaatagctccactacagcacaaatgtgcagcaatccgagactttccgacgcctaaaaca
gtaaaacaagcacagagatttttaggaatgattaattactacagacgattcattccaaat
tgctccaagattgcacagccaatccaactgtttatttgtgacaaaagtcaatggacagaa
aaacaagacaaggcaattgataaactaaaagacgccttgtgtaactcccccgtcctagta
ccattcaacaacaaagcaaactaccgacttacaacagacgcctcaaaagacggcattggt
gctgttctagaagaagtcgacaacaagaacaaacttgttggtgtcgtcggttacttctct
aaatccttagagagtgcccagaaaaactatcctgctggcgaattagaactacttggaatt
atcaaagcactccaccacttccgatatatgcttcacggaaagcatttcacgttaagaaca
gaccacattagtttgttatcattacaaaacaagaacgaacccgcacgacgcgtgcaacgc
tggttagatgacctagccacatatgacttcaccttagaatacctagctggacccaagaac
gttgtcgcagatgccatatcccgtgccgtatatactataacccccgaaacatcccgacct
atcgacacagaaagctggaaatcttactacaaatcagacccattatgtagtgctgtctta
attcatatgaaagaattgacacaacacaacgtcacacctgaagatatgtcagccttccgt
agttaccagaagaaactcgaactatcagagaccttccgaaagaattattccctagaagac
gaaatgatctattaccaagaccgactagtagtaccaataaaacaacagaacgcagttatg
agactatatcatgaccataccttatttggaggacattttggtgtaacagtgacccttgcg
aaaatcagcccaatttactattggccaaaattacaacattcgatcatacaatacatcagg
acctgcgtacaatgtcaactaataaaatcacaccgaccacgcttacatggactattacaa
ccactccctatagcagaaggaagatggcttgatatatcaatggattttgtgacaggatta
cccccgacatcaaataacttgaatatgatcctcgtcgtagttgatcgtttttcgaaacgc
gctcacttcatagctacaaggaaaaccttagacgcaacacaactaatagatctactcttt
cgatacattttttcatatcatggttttcccaggacaataaccagtgatagagatgtccgt
atgaccgccgacaaatatcaagaactcacgaaaagactaggaataaaatcgacaatgtct
tccgcgaaccacccccaaacagatggacaatccgaacgaacgatacagacattaaacagg
ttactaagagcctatgcttcaaccaatattcagaattggcatgtatatttaccacaaatc
gaatttgtttacaattctacacctactagaacacttggaaaatcaccatttgaaattgat
ttaggatatttaccgaatacccctgctattaagtcagatgacgaagtcaacgcaagaagt
tttactgccgtagaacttgccaaacacctcaaagcccttaccatccaaacgaaggaacag
ctagaacacgctcaaatcgaaatggaaactaataacaatcaaagacgtaaacccttattg
ttaaacataggagatcacgtattagtgcatagagatgcatacttcaagaaaggtgcttat
atgaaagtacaacaaatatacgtcggaccatttcgagttgtcaagaaaataaacgataac
gcctacgaactagatttaaactctcacaagaaaaagcacagagttattaatgtacaattc
ctgaaaaagtttgtataccgtccagacgcgtacccaaagaataaaccaatcagctccact
gaaagaattaagagagcacacgaagttactgcactcataggaatagatactacacacaaa
acttacttatgtcacatgcaagatgtagacccaacactttcagtagaatactcagaagct
gaattttgccaaattcccgaaagaacacgaagatcaatattagccaactttagacaactc
tacgaaacacaagacaaccctgagagagaggaagatgttgtatctcaaaatgagatatgt
cagtatgacaatacgtcaccctga
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integrated database retrieval system
