KEGG   Saccharomyces cerevisiae (budding yeast): YHR031C
Entry
YHR031C           CDS       T00005                                 
Symbol
RRM3, RTT104
Name
(RefSeq) DNA helicase
  KO
K15255  ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:sce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sce03032]
    YHR031C (RRM3)
   03029 Mitochondrial biogenesis [BR:sce03029]
    YHR031C (RRM3)
Enzymes [BR:sce01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     YHR031C (RRM3)
DNA replication proteins [BR:sce03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    YHR031C (RRM3)
Mitochondrial biogenesis [BR:sce03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA maintenance factors
    YHR031C (RRM3)
SSDB
Motif
Pfam: PIF1 AAA_30 AAA_19 AAA_7 AAA_22 Herpes_Helicase Pif1_2B_dom DEAD AAA Viral_helicase1 SH3_13 SLFN-g3_helicase Mg_chelatase PhoH T2SSE FtsK_SpoIIIE AAA_5 AAA_16 Sigma54_activat Helicase_RecD
Other DBs
NCBI-GeneID: 856426
NCBI-ProteinID: NP_011896
SGD: S000001073
UniProt: P38766
LinkDB
Position
VIII:complement(170799..172970)
AA seq 723 aa
MFRSHASGNKKQWSKRSSNGSTPAASASGSHAYRQQTLSSFFMGCGKKSAAASKNSTTII
DLESGDEGNRNITAPPRPRLIRNNSSSLFSQSQGSFGDDDPDAEFKKLVDVPRLNSYKKS
SRSLSMTSSLHKTASASTTQKTYHFDEDETLREVTSVKSNSRQLSFTSTINIEDSSMKLS
TDSERPAKRSKPSMEFQGLKLTVPKKIKPLLRKTVSNMDSMNHRSASSPVVLTMEQERVV
NLIVKKRTNVFYTGSAGTGKSVILQTIIRQLSSLYGKESIAITASTGLAAVTIGGSTLHK
WSGIGIGNKTIDQLVKKIQSQKDLLAAWRYTKVLIIDEISMVDGNLLDKLEQIARRIRKN
DDPFGGIQLVLTGDFFQLPPVAKKDEHNVVKFCFESEMWKRCIQKTILLTKVFRQQDNKL
IDILNAIRYGELTVDIAKTIRNLNRDIDYADGIAPTELYATRREVELSNVKKLQSLPGDL
YEFKAVDNAPERYQAILDSSLMVEKVVALKEDAQVMMLKNKPDVELVNGSLGKVLFFVTE
SLVVKMKEIYKIVDDEVVMDMRLVSRVIGNPLLKESKEFRQDLNARPLARLERLKILINY
AVKISPHKEKFPYVRWTVGKNKYIHELMVPERFPIDIPRENVGLERTQIPLMLCWALSIH
KAQGQTIQRLKVDLRRIFEAGQVYVALSRAVTMDTLQVLNFDPGKIRTNERVKDFYKRLE
TLK
NT seq 2172 nt   +upstreamnt  +downstreamnt
atgttcaggtcgcatgcctccggtaacaagaagcaatggtctaaaagatcctcaaatggt
agcacacctgctgcttcggcatctggctctcacgcatacaggcaacaaacgttgtcttcg
ttctttatgggttgcggcaaaaaatctgctgctgcttcaaaaaacagcacgacaataatt
gatttggaaagcggtgacgaaggtaaccgtaatataacagcacctcctaggccaagatta
atacggaataattcgtcttccttattctcgcagagtcaaggttcgtttggagatgatgat
cccgacgcagaattcaaaaaattggtagatgtgccgagactcaatagctataaaaagtct
agcagatcgctgtcgatgaccagctctcttcataagactgcctctgcgtccacgactcag
aaaacataccattttgatgaggatgagactttgcgagaggttactagcgtgaaatccaat
tctagacaattatcgttcactagtacaattaatattgaagattctagcatgaaactttct
actgattcagaaagaccagccaagaggtctaaaccttctatggagtttcaaggtttaaag
ctcacagtaccaaagaaaataaaaccactgctaagaaagacagtatcaaatatggactca
atgaaccaccgaagtgcgtcttcgccagtggtacttacaatggagcaagagagagtggtt
aatttaatcgtcaaaaaaagaacaaatgtcttttacaccggtagtgcgggtacaggtaag
tcggtcattttgcaaacgatcataagacaattgagctctttgtatgggaaagaatcaatt
gcaattaccgcctcaactgggctagcggcagtgactattggtggttccacattgcataag
tggtctggtataggaatcgggaacaaaactatcgaccaattggtgaaaaaaatacaatca
caaaaggacttattggccgcatggaggtatacaaaagttttgataattgatgaaatttct
atggtcgatggtaatctgttggataaattagagcaaatcgcaaggagaattcggaagaac
gacgatccctttggtggtattcaattggtcctgacaggcgatttttttcaactaccacca
gttgctaagaaggacgagcataacgttgtgaaattttgttttgaaagtgaaatgtggaaa
cggtgcattcaaaaaacgattttactgacaaaggttttcagacaacaggataacaaacta
attgatattctaaatgccataagatacggagagctgactgtcgacattgctaaaacaata
aggaacctaaatagggatatagactatgccgatggaattgctcctacagaactgtatgcc
acaagaagagaagttgaactatccaacgtaaagaaattacagtctctacctggtgattta
tatgagtttaaagctgtagataacgcgcccgagagataccaagcgatactagattcttca
ttaatggtggaaaaagttgtcgcattgaaggaagatgcacaggtaatgatgttgaaaaat
aagcctgatgtagaattagttaatggatcattgggaaaagttttgttttttgttacagaa
tcgctggtggtgaaaatgaaggaaatttacaagattgtggatgacgaagttgtcatggac
atgagattagtgagtcgggtcattggtaatcccttgttaaaggaatcaaaggagtttcgt
caagatttgaatgccaggccattagctagattggaacgtttgaaaatcttgataaactat
gcagttaagatctctccgcataaggaaaaattcccctatgtgaggtggacagtgggtaaa
aacaagtacatacatgagctcatggtcccagagcgctttcccattgatattcccagagaa
aatgtcgggttagaaagaactcagattccattaatgctatgctgggcactgtccattcat
aaggcacagggtcaaactattcaaagactaaaggtcgacttgaggagaattttcgaagcc
ggccaagtttatgttgcactgtcaagagcggtaactatggacaccttacaggtcctaaac
tttgatccaggaaagattcgcaccaatgaaagagtaaaagatttctataaacgtttagaa
actttgaaatga

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