Saccharomyces cerevisiae (budding yeast): YKR079C
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Entry
YKR079C CDS
T00005
Symbol
TRZ1
Name
(RefSeq) tRNase Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sce03016
]
YKR079C (TRZ1)
Enzymes [BR:
sce01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
YKR079C (TRZ1)
Transfer RNA biogenesis [BR:
sce03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
YKR079C (TRZ1)
Prokaryotic type
YKR079C (TRZ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
LD_cluster2
Motif
Other DBs
NCBI-GeneID:
853954
NCBI-ProteinID:
NP_013005
SGD:
S000001787
UniProt:
P36159
Structure
PDB
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All DBs
Position
XI:complement(586789..589305)
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AA seq
838 aa
AA seq
DB search
MFTFIPITHPTSDTKHPLLLVQSAHGEKYFFGKIGEGSQRSLTENKIRISKLKDIFLTGE
LNWSDIGGLPGMILTIADQGKSNLVLHYGNDILNYIVSTWRYFVFRFGIDLNDHIMKDKE
VYKDKIIAVKSFNVLKNGGEDRLGVFDSFQKGVLRSIVAKMFPKHAPTDRYDPSSDPHLN
VELPDLDAKVEVSTNYEISFSPVRGKFKVEEAIKLGVPKGPLFAKLTKGQTITLDNGIVV
TPEQVLENERHFAKVLILDIPDDLYLNAFVEKFKDYDCAELGMVYYFLGDEVTINDNLFA
FIDIFEKNNYGKVNHMISHNKISPNTISFFGSALTTLKLKALQVNNYNLPKTDRVFSKDF
YDRFDTPLSRGTSMCKSQEEPLNTIIEKDNIHIFSQNKTVTFEPFRMNEEPMKCNINGEV
ADFSWQEIFEEHVKPLEFPLADVDTVINNQLHVDNFNNSAEKKKHVEIITLGTGSALPSK
YRNVVSTLVKVPFTDADGNTINRNIMLDAGENTLGTIHRMFSQLAVKSIFQDLKMIYLSH
LHADHHLGIISVLNEWYKYNKDDETSYIYVVTPWQYHKFVNEWLVLENKEILKRIKYISC
EHFINDSFVRMQTQSVPLAEFNEILKENSNQESNRKLELDRDSSYRDVDLIRQMYEDLSI
EYFQTCRAIHCDWAYSNSITFRMDENNEHNTFKVSYSGDTRPNIEKFSLEIGYNSDLLIH
EATLENQLLEDAVKKKHCTINEAIGVSNKMNARKLILTHFSQRYPKLPQLDNNIDVMARE
FCFAFDSMIVDYEKIGEQQRIFPLLNKAFVEEKEEEEDVDDVESVQDLEVKLKKHKKN
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgttcacatttatacccatcacccatcctacatcggatacaaagcacccattgctgcta
gtccagtctgcacatggggaaaagtatttcttcggtaaaattggtgaaggatcccaaagg
agtctgactgaaaataagatcaggatatccaaattgaaggatattttccttactggtgaa
ttaaactggtcagatataggtggattacctggaatgattttgactattgctgatcaaggg
aaaagtaatcttgttttgcattacggcaatgacattttgaattacatagtttccacttgg
agatacttcgtctttagattcggaatagacttgaacgatcacattatgaaagacaaggaa
gtatataaagataagataatagctgttaaatcctttaatgttctgaaaaatgggggggaa
gacaggttaggcgtcttcgatagttttcaaaaaggtgtattacgttccatagtagcaaaa
atgttccccaaacatgcacccaccgataggtacgatccttctagtgatccgcacttgaat
gtagagttgcctgacttagacgccaaagtggaagtttctacgaattacgagatttcattc
agtccagtgaggggtaaatttaaagtggaggaagctattaaactaggtgttccgaagggt
cccttatttgcaaagttaaccaagggccaaacaattactttggataacggtattgttgta
actccggaacaggtattggagaatgaacgtcattttgccaaagtattgatcctggatatc
ccagatgacctatatttgaacgctttcgtagaaaaattcaaggattatgattgtgctgag
cttggcatggtgtattattttcttggtgatgaggttaccattaatgataatctattcgcg
ttcattgacatatttgagaaaaacaattatggtaaagtaaatcatatgatatcccacaat
aaaatttctccaaacacgatatcatttttcggttctgcattgaccacattgaaattaaag
gcactacaagtaaataattacaatttaccaaaaacagatcgtgtgttttccaaggacttc
tacgacagattcgatacaccactcagcagaggtacatctatgtgtaaatcccaggaagag
cctttgaatacaataatagagaaggataacattcatattttttcacaaaacaagacagta
actttcgaaccatttcggatgaacgaagaaccgatgaaatgcaacatcaacggtgaagtg
gcggatttctcgtggcaagaaattttcgaagaacatgtaaaaccattagaatttccctta
gctgatgtcgatacagttatcaataatcaactacacgtggataactttaacaattcagca
gaaaagaagaaacacgttgaaattatcaccttaggaaccggtagtgcattgccttctaaa
tatagaaacgttgtctccacacttgttaaagttccttttactgacgccgatggaaatacc
ataaatagaaacattatgctagatgctggtgaaaatactttaggtaccatacacaggatg
ttttctcagctagcagtcaagtcaatatttcaggatttgaaaatgatatatctgagtcac
ttgcatgcagaccaccatttgggaataatcagcgtgctaaatgaatggtacaaatataac
aaggatgatgaaacgagttatatatatgtggttactccatggcaatatcacaaatttgtt
aatgaatggttagttctagaaaataaagagattttaaagagaatcaaatacataagttgt
gagcatttcatcaatgattcgtttgtaagaatgcagacacaatctgttcctttggcagag
ttcaatgaaatattgaaagaaaatagcaatcaagaatcaaacagaaaactggaactggat
agagattcttcatatagggatgttgacttgatcagacaaatgtatgaggatttatcgata
gaatattttcaaacttgcagagctatacattgtgactgggcatattcgaactcaattacc
ttccgaatggacgaaaacaatgagcataatacattcaaggtttcatattcaggcgataca
agacctaacatcgagaaattttccctcgaaataggctataattcagatctattaattcac
gaagctacactagaaaatcagctactggaggatgccgtgaagaaaaaacactgcactatt
aatgaagcaatcggtgtttcgaacaaaatgaatgctaggaagttgatcttaacacacttt
tcccagagatatcccaaattgccccaattagacaataatattgatgtgatggcgagagaa
ttttgttttgctttcgacagtatgatcgttgattatgagaaaattggtgaacagcagcgt
atttttccactgctgaataaggcatttgttgaagaaaaggaagaagaagaagatgttgat
gacgttgaaagcgtacaagatttggaagtcaaacttaagaaacacaagaaaaattag
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