Saccharomyces cerevisiae (budding yeast): YOR001W
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Entry
YOR001W CDS
T00005
Symbol
RRP6
Name
(RefSeq) exosome nuclease subunit RRP6
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YOR001W (RRP6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YOR001W (RRP6)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
YOR001W (RRP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
854162
NCBI-ProteinID:
NP_014643
SGD:
S000005527
UniProt:
Q12149
Structure
PDB
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All DBs
Position
XV:326832..329033
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AA seq
733 aa
AA seq
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MTSENPDVLLSRVINVVRAASSLASQDVDFYKNLDRGFSKDLKSKADKLADMANEIILSI
DEHHESFELKEEDISDLWNNFGNIMDNLLEMSDHSLDKLNCAINSKSRGSDLQYLGEFSG
KNFSPTKRVEKPQLKFKSPIDNSESHPFIPLLKEKPNALKPLSESLRLVDDDENNPSHYP
HPYEYEIDHQEYSPEILQIREEIPSKSWDDSVPIWVDTSTELESMLEDLKNTKEIAVDLE
HHDYRSYYGIVCLMQISTRERDYLVDTLKLRENLHILNEVFTNPSIVKVFHGAFMDIIWL
QRDLGLYVVGLFDTYHASKAIGLPRHSLAYLLENFANFKTSKKYQLADWRIRPLSKPMTA
YARADTHFLLNIYDQLRNKLIESNKLAGVLYESRNVAKRRFEYSKYRPLTPSSEVYSPIE
KESPWKILMYQYNIPPEREVLVRELYQWRDLIARRDDESPRFVMPNQLLAALVAYTPTDV
IGVVSLTNGVTEHVRQNAKLLANLIRDALRNIKNTNEEATPIPSSETKADGILLETISVP
QIRDVMERFSVLCNSNISKSRAKPVTNSSILLGKILPREEHDIAYSKDGLPNKVKTEDIR
IRAQNFKSALANLEDIIFEIEKPLVVPVKLEEIKTVDPASAPNHSPEIDNLDDLVVLKKK
NIQKKQPAKEKGVTEKDAVDYSKIPNILSNKPGQNNRQQKKRRFDPSSSDSNGPRAAKKR
RPAAKGKNLSFKR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgaaaatccggatgtacttttatctagggtgataaatgtggtgagagcagca
tcatcgttagccagtcaagatgtagacttttacaagaatttagacaggggatttagtaaa
gatctgaaatcaaaagcagacaaacttgcggatatggcgaatgaaataatcctctctatt
gatgagcatcatgaatcatttgaacttaaagaagaggacatttctgacttgtggaacaac
tttggaaacatcatggataatttgttagaaatgtcagaccattcgctggataagctgaat
tgtgcaataaactcaaagtcaagaggttccgatcttcagtatttaggcgaattttcagga
aagaatttttctcccaccaaaagagtcgaaaaacctcagttgaaatttaaaagtccaatt
gataacagcgaaagtcatccgttcatacctttattgaaggaaaaaccaaatgctttgaag
ccactctctgagagtttgaggttggttgatgatgatgaaaataaccccagtcactacccc
catccttatgaatatgagattgatcatcaagagtatagtccagaaattctccaaattaga
gaggagattccctcaaaatcctgggatgattcggtaccaatttgggtagatacaagtaca
gaactcgaatcaatgttggaggacttgaaaaatacgaaagagattgccgttgatcttgag
catcacgattataggtcatactatggtattgtttgcctcatgcaaattagtacaagggaa
agggattatttagttgatactctaaaacttcgcgaaaatttacatattctgaacgaagtg
tttacgaacccttcaattgtgaaagtttttcacggtgcattcatggatattatttggctt
cagcgagatttaggtttgtatgtcgttggtctcttcgatacttaccatgcgtctaaagca
atcggtcttcctagacatagtttggcctatcttttggagaattttgccaattttaaaact
tcaaagaaatatcagttggctgactggcgtataagaccgctttcaaaacccatgacggca
tatgctagagcagatactcactttttactaaatatatatgaccagttgagaaacaaactt
atcgagtctaataagttagcaggtgttctttatgaatcaagaaatgtcgcaaaaagaagg
tttgaatattcaaagtacagaccactgacaccttcttcagaagtttattctccaatcgaa
aaagagagtccttggaaaatattgatgtatcagtacaacataccacctgagagggaagta
ttagtaagagagctataccaatggagagatcttattgcaagaagagacgatgaatcgcca
cgatttgttatgccaaaccagttattggctgcacttgtcgcatatacacctactgatgtc
ataggtgttgtttctttgaccaatggcgtaactgaacatgtccgccagaatgcaaaacta
ttagctaatttgataagagatgcattacgaaacatcaagaacaccaatgaggaagctact
cccattccatcttccgagaccaaagcagacggaatattgttggagactataagtgttcct
caaatccgtgatgttatggaaaggttttcggtgttgtgcaacagcaatatttccaagagc
cgagccaagcctgtcactaattcttctattctgttgggtaagattttaccacgtgaggag
catgatattgcatatagcaaagacggcttgccaaataaagtgaagacggaagatatcagg
atccgagcacaaaatttcaagtctgccttagcaaacttggaggatatcatattcgaaata
gagaaacctctcgttgttcctgtcaagctagaggagattaagacagtagaccctgcgagc
gcacctaatcactcgcctgagattgataatcttgatgatcttgttgttttaaagaagaaa
aacattcaaaagaaacaaccagcaaaggaaaaaggtgtaacggaaaaagatgctgtggat
tattcaaaaattccgaatatcttatctaataagcctggccaaaataatagacaacaaaag
aaaaggagattcgacccatcatctagcgatagtaatggaccaagggcagctaaaaagagg
aggcctgccgccaaaggtaagaatctgtcatttaaaaggtga
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