Shewanella chilikensis: GII14_00465
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Entry
GII14_00465 CDS
T08813
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
schk
Shewanella chilikensis
Pathway
schk00540
Lipopolysaccharide biosynthesis
schk01100
Metabolic pathways
schk01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
GII14_00465 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
schk01005
]
GII14_00465 (rfaD)
Enzymes [BR:
schk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
GII14_00465 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
schk01005
]
Core region
GII14_00465 (rfaD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
QIJ02795
UniProt:
A0A6G7LMC2
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All DBs
Position
complement(101357..102310)
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AA seq
317 aa
AA seq
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MIVVTGAAGFIGSNLVKALNNLGRSDIIAVDDLTDGTKMFNLADCEIADYLDKADFIEQI
TQGQFDNKVEVIFHQGACSSTTEWDGKFMMANNYEYSKTLLHFCERTGSQFIYASSASVY
GGSDKFVEQRELEKPLNVYAYSKFLFDQYVRQHSFTTQVAGLRYFNVYGPREQHKGGMAS
VAFHFNNQIKANGICRLFQGHDGFEDGKQLRDFVYVEDVVKVNLWLWQNPSVSGVYNCGT
GQAQSFNDVANAVIAYHGKGEIEYIPFPDKLKGAYQSYTQADLTRLRAAGYTQAFKTVEQ
GVPEYLDWLAAQHFIGQ
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatagtagtcacaggtgccgcaggctttattggaagcaacttagttaaagcgctcaat
aacttaggacgtagtgatattattgccgtagatgacctgaccgacggcaccaagatgttt
aatctcgccgactgtgaaatcgccgattatctggataaagcagacttcatcgaacagata
acccaaggacaattcgataacaaggttgaagtgatcttccatcaaggcgcctgttcgtcg
accacagagtgggacggcaagtttatgatggctaacaactacgagtattccaaaaccctg
ctccacttttgtgagcgtaccggcagccagtttatctatgcatcttcggcctctgtttac
ggcggcagcgataagtttgtcgagcagcgggagctggaaaagccgctcaacgtctatgcc
tactccaagttcctcttcgatcaatatgtcaggcaacatagcttcacgactcaagtggcc
ggactacgttacttcaacgtttatggaccaagagaacaacataagggcggcatggctagc
gtagcctttcacttcaacaatcagatcaaggcgaatggcatctgccgcctatttcagggc
cacgacggcttcgaagatggtaaacaactgagagacttcgtgtatgtcgaagatgtagtc
aaggtcaacctctggctatggcaaaatccgagtgtctcaggggtgtacaactgtggtacg
ggtcaagcacagagcttcaacgatgtggccaatgcggtgatcgcttatcacggtaagggg
gaaatcgaatatattcctttcccggataagctcaaaggcgcctatcaaagctatacccag
gcggatctcactcggcttagggctgctggatatactcaggcctttaaaacagtcgagcaa
ggagtacccgagtatttggactggctggccgcgcaacactttatcggtcagtaa
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