KEGG   Shewanella chilikensis: GII14_05400
Entry
GII14_05400       CDS       T08813                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
schk  Shewanella chilikensis
Brite
KEGG Orthology (KO) [BR:schk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:schk02048]
    GII14_05400
Enzymes [BR:schk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     GII14_05400
Prokaryotic defense system [BR:schk02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   GII14_05400
SSDB
Motif
Pfam: EcoR124_C SWI2_SNF2 HSDR_N ResIII DEAD HSDR_N_2 SNF2-rel_dom
Other DBs
NCBI-ProteinID: QIJ03674
UniProt: A0A6G7LPN7
LinkDB
Position
1155445..1158558
AA seq 1037 aa
MTTYKTVAESNNFIVLDKYTRQDQIAEGYQSEGDLERELIQDLVNQGYEYLPALTTPDAM
MANVRKQLQALNKVEFTDAEWARFCEQYLNTPSDNILDKTRKVHSDYIFDFVFDDGHIEN
IYLFDKKTIARNKVQVIKQFEQTGSHANRYDVTILVNGLPLVQIELKKRGVAIREAFNQI
HRYSKESFNSDHSLYKFLQLFVISNGTDTRYFANTTKRDKNSFDFTMNWAKSDNTLIKDL
KDFTATFFQKETLLEVILRYSVFDVSNTLLVMRPYQIAATERILWKIKSAFNAKDWAKPE
SGGYIWHTTGSGKTLTSFKAARLATDLDCIDKVFFVVDRKDLDYQTMKEYQRFSPDSVNG
SDSTAGLKSNLDKDDNKIVVTTIQKLNNLIKSESNLAIYNKQVVFIFDECHRSQFGEAQK
NLKKKFKKYYQFGFTGTPIFPENALGAETTGSVFGQQLHTYVITDAIRDEKVLKFKVDYN
DVRPQFKSIETEQDDKKLSAAENKKAFLHPMRIGEISQYILSHFNQKTHRAYSGAKGFNA
MFAVSSVDAAKAYYETFKTLQAEAENGPTSKPLRIATIFSFAANEEQDAIGDILDESFEV
SAMNSSAKEFLSAAINDYNAMFKSNYGVDSNGFQNYYRDLAQRVKNQEIDLLIVVGMFLT
GFDAPTLNTLFVDKNLRYHGLMQAFSRTNRIYDATKTFGNIVTFRDLEQATIDAITLFGD
KNTKNVVLEKSYKEYMEGFNDIATGQARRGFVDIVKELQERFPNPENIEKEQDKKEFAKL
FGEYLKAENILQNYDEFAGLKALQSLDTSDEQAVEAFKSKYYLDDADIEAMQTIDMPSER
AIQDYRSTYNDTRDWLRRDKEGQDKDKSTVDWDDVVFEIDLLKSQEINLDYILELIFDHN
KKNKSKEGLIEEVRRMIRGSLGNRAKESLVVDFINQTNLDEINDKASIIDAFFKFAQAEQ
KREADAIIASEKLNIDAAKRYIASSLKREYASENGTALNEALPKLSPLNPQYRTQKQTVF
QKIAAFVEKFKGVGGQI
NT seq 3114 nt   +upstreamnt  +downstreamnt
atgacaacgtataaaacggtggcagaatcgaataactttattgttttagataaatacaca
cgccaagaccaaattgctgagggctaccagagcgaaggtgatttagagcgtgaactgatc
caagacttagttaatcagggctatgaatatttacctgcgctaaccacgcccgatgccatg
atggcgaatgtgcgtaaacaattacaagccctcaataaggtcgagtttactgatgccgag
tgggctcgcttttgcgagcaatacctgaacacacccagcgacaatattcttgataaaacc
cgcaaggtgcacagtgactatatcttcgattttgtcttcgatgatggccatatagaaaat
atctacctgttcgacaagaagaccattgctcgtaacaaagtgcaggtcattaagcagttt
gagcaaacaggaagccatgccaaccgttacgatgtgacgattttggttaatggtttgcct
ttggtgcaaattgaactgaaaaagcggggtgtggcgatccgtgaggcgtttaaccaaata
catcgctacagcaaagagagctttaatagcgatcactccttgtacaagttcttgcagctg
tttgtgatctcgaatggcaccgacacgcgctattttgccaataccaccaagcgtgacaag
aacagcttcgactttacgatgaactgggcgaagtcagacaatacgctgatcaaggattta
aaagactttacggcgacttttttccagaaagagaccttgcttgaagtgattttgcgttac
tcggtgtttgacgtcagcaataccttacttgtaatgcgcccttaccaaattgcggctact
gagcgcattttatggaagataaagagcgcgtttaacgctaaagactgggctaagcctgaa
agtgggggttacatttggcacactacgggttcaggcaaaacactcaccagctttaaagcg
gcacgtttggccaccgatttagactgtatcgataaagtcttttttgtggtggaccgaaaa
gacctcgactatcagaccatgaaagagtatcagcgcttctcgcctgatagtgtgaacggt
tcagacagtaccgcagggcttaaaagtaacctggacaaagacgataacaagattgttgtt
accacaatccaaaagctcaacaacttaatcaaaagcgaaagcaatttagctatctacaac
aagcaagtcgtttttatttttgatgagtgtcatcgaagccagtttggtgaagcgcagaaa
aacctgaagaagaaattcaaaaagtactaccagtttggttttaccggtacgcccattttc
cctgaaaacgccttgggtgctgaaaccacgggcagcgtgtttggccagcagttgcacact
tatgtgatcactgacgccattcgtgatgaaaaagtacttaagttcaaagtggactataac
gatgttcgtccgcaatttaagagcattgagactgagcaggatgataagaagcttagtgcg
gcggagaacaagaaagcgttcttacatccaatgcgcattggtgaaatctcgcagtatatt
ctgagccattttaaccagaaaacgcatcgagcctattctggcgccaaagggtttaatgcc
atgtttgcggtaagtagtgttgatgcagcgaaagcctattatgaaaccttcaagacattg
caggccgaggctgagaatggacctacaagtaaaccgctgcgcattgcaactatcttctca
tttgctgccaatgaagagcaggacgccattggtgatattttagatgagagctttgaagtc
agtgccatgaacagcagcgcgaaagagtttttgagcgccgcgattaacgattacaacgcc
atgtttaaatctaactatggcgtggacagtaatggttttcagaattattaccgtgacctt
gcccagcgagtgaagaatcaagaaatagatctactcatagtggttggtatgtttttaacg
ggctttgatgcgcctacgcttaacaccttgtttgttgataagaatttgcgctatcacggt
ttgatgcaggcgttttctcgcactaaccgcatttatgatgcaactaagacctttggcaat
attgttaccttccgtgatttggagcaggcaaccattgatgccatcaccttgtttggtgac
aaaaacaccaaaaacgtggtgttggagaagagctacaaagaatacatggaaggttttaac
gatattgctactgggcaggcgcgtcgaggttttgttgatatcgtaaaagagctgcaagaa
cgctttccaaacccagaaaatattgaaaaagaacaagataaaaaggaatttgccaagcta
tttggtgaatacctcaaagcagaaaatattttacaaaactacgatgaatttgctggcttg
aaagcactgcaaagccttgataccagtgatgaacaagcggttgaagcgttcaagtcaaag
tactatctggacgatgctgacatcgaggcaatgcaaaccatcgatatgccaagcgaacgt
gctattcaagattatcgctctacctataacgatacccgcgactggttacgccgcgataaa
gaaggtcaggacaaagataagtcaacggtagactgggacgatgtggtctttgaaattgat
ttgcttaaatcgcaagaaatcaacctcgattacattcttgaactgatttttgatcacaat
aagaagaacaagagcaaagaaggcttgattgaagaagtccgccgtatgatccgtggtagc
cttggtaatagagcgaaagagagcttagtggttgattttattaaccagacaaacctagat
gagatcaatgacaaagccagcattatcgacgctttcttcaaattcgcccaggcggagcag
aagcgcgaagccgatgccattattgcctctgaaaagctcaatatcgatgctgccaaacgt
tatattgcatcatcactcaaacgtgagtacgcctctgaaaatggcactgctcttaatgag
gcgctgcccaaacttagcccattgaacccacagtaccgaacccagaagcaaacggttttt
cagaaaattgccgcttttgttgaaaaattcaaaggtgtgggtgggcagatatag

DBGET integrated database retrieval system