Siniperca chuatsi (mandarin fish): 122869083
Help
Entry
122869083 CDS
T08948
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
schu03016
]
122869083 (tsen54)
Transfer RNA biogenesis [BR:
schu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
122869083 (tsen54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
122869083
NCBI-ProteinID:
XP_044037595
LinkDB
All DBs
Position
LG21:2609965..2622655
Genome browser
AA seq
527 aa
AA seq
DB search
MADENKADTEGKFFSEILSPSELFAARSRSHKIPVRGQKDFFPNDSDEQRRRLEQSLNEH
WSLLSEERVEKLGNLVKAAWIPSEQIVELQSPAGKFWQTMGFSASGKQYLLPEEALYLME
CGNLQVFYQDLPLSIQDGYEKFLSSSTVSLQQYQVFGHLKRLGYVVHRFDPSSEPLSYAR
QLNLPQSRDRAGRQLKRKRSPSPTPTATPSHTEVQEESTTDRMEEDKCVHEGEEDETLPE
SHLMTSPGTSGTQTAAASSADKGGGRTWWMTDVLGDQSDHQPAPGSSQWDFSSIPFPDLG
SRERLSSCLAPPNPSLLPGSLAVGVCDVAPWRQRINLRKVKMSSKEQKREKDKHRRRWDV
NKDREVRRCRNWAEYRELLAGRQRRRKGRPAHLWNREVTPLHDPRQPIPTGELLDKISVI
KSSHLLEGASRLKGSDEWRICFSVYQPDTVADFKKSNPGKPYSRMCVCSFDGPVPDLRAI
KLLAFQSGDIPVVFAVVDHGDISFYTFKDFQLPTDVYPSPHCSLTSL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaaaacaaggcagacaccgaagggaagttctttagtgaaatattaagtcca
tctgaactgtttgcagcccggtccaggagtcacaagatcccggtcagaggacagaaggac
ttcttccccaatgactcagacgagcaaagacggcggcttgagcagagtctgaatgagcac
tggagcctcctatcagaggagagagtggagaagctaggaaacctagtgaaggccgcatgg
attccaagtgagcagatagtggagcttcagtctccagctggaaagttttggcagacgatg
ggcttttctgccagcggcaagcagtatctcctccctgaagaggctctctacctgatggag
tgtggaaacctgcaggtgttttaccaggacctgccgctgtccatccaggacgggtacgag
aaatttttgtcctcgagcacagtgagcctccagcaatatcaggtgttcgggcatttgaag
aggcttggctatgtggtgcacagattcgatcccagttcggagccattgtcctatgcgagg
cagctgaacctgcctcagtcacgtgacagagcagggagacaactgaagaggaagcgcagc
cccagccccacccccaccgcaacacccagtcatactgaagtacaagaagaatccacaact
gacagaatggaggaggataaatgcgttcatgaaggtgaggaggatgaaacacttcctgag
tcacacctgatgacatctccagggacttcagggacccagactgctgctgcaagttcagca
gacaaaggtgggggcaggacctggtggatgactgatgttctcggggaccaatcggatcac
cagcccgcccctggttcctcacaatgggacttcagctcaatccctttcccagacctgggc
tccagggagcgcctctccagctgcctggcccctccaaacccctctctgctccctgggtct
ttagctgtgggagtctgtgacgtcgccccctggaggcagagaataaacctgcggaaggtg
aagatgtcctcaaaggagcagaagagggaaaaggacaagcataggcgccggtgggatgtc
aacaaagacagagaggttcggcggtgcagaaactgggcagagtatcgggagctcctggcg
gggcggcagcggaggcgtaaaggccgaccagcacacttgtggaacagggaagtcactcct
ttacatgacccaaggcaaccaatccccactggggagctgttggataaaatcagtgtgatt
aaatcttcacatttactcgagggagcatccaggttaaaagggtcagatgagtggaggatt
tgtttcagtgtttaccaacctgatacggtggctgacttcaagaaaagcaacccggggaaa
ccgtactcccgcatgtgtgtgtgcagtttcgacggccctgtgcctgacctgcgagccatc
aagctgctggccttccagagtggagacatcccagtggtctttgctgtggtggaccacgga
gacatctccttctacaccttcaaagacttccagctgcccactgatgtgtacccgtcacct
cactgctctttaacatcgctgtaa
DBGET
integrated database retrieval system
