KEGG   Siniperca chuatsi (mandarin fish): 122885258
Entry
122885258         CDS       T08948                                 
Symbol
ccnt2a
Name
(RefSeq) cyclin-T2a isoform X1
  KO
K15188  cyclin T
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:schu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122885258 (ccnt2a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:schu03021]
    122885258 (ccnt2a)
Transcription machinery [BR:schu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     122885258 (ccnt2a)
    Brd4/P-TEFb complex
     122885258 (ccnt2a)
    7SK RNP complex
     122885258 (ccnt2a)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N
Other DBs
NCBI-GeneID: 122885258
NCBI-ProteinID: XP_044072032
LinkDB
Position
LG12:complement(7121071..7131155)
AA seq 756 aa
MVSPSKKSWFPVQYRRHIRFLDAQRWRAMAACRGSSSKWFFTREQLENTPSRRCGVEPDR
ELSYRQQAANLIQDMGQRLNVSQLTINTAIVYMHRFYMHHSFTKFHRNIISPTTLFLAAK
VEEQPRKLEHVIKVAHACLNPQEPPLDTKSNAYLQQAQELVILESIVLQTLGFEITIDHP
HTDVVKCSQLVRASKDLAQTSYFMATNSLHLTTFCLQYKPTVISCVCIHLACKWSNWEIP
VSTDGKHWWEYVDNSVTLELLDELTHEFLQILEKTPSRLKRIRNWRATQAAKKPKTEGAQ
LTDNSFAGPSMLQDQADASLAGVSSNPSFSKAGAAFTVPMPGQSGGAPLSLDTLAGTYNP
ASHSEWPQGNQSLAGYPSTCLRQDPLSIPHQEPTLSLQTSTSSLLQHPPVYRTEKTVDFN
LVKQEPKGAGGSGVGKHQPPPQSAYLVQPPPPQPSSAQKLSLDKYREKHAAELAVSGQKR
SQEQHGGVLDCDVRGDMSSSSSSTYAPSSTGQVDHRKHSQPHQSSHGGGGSTTASPMKMK
VPSSTSGQDRRHHGDKRDKGSLKLRLAVPGSGGSSQLDKSGQPNKDELKMKIKVSSSERH
SSSDEGMASNNNKSKHSSPLVSKEKQHYGADHNLHRHHKHSHPHPHTHSGNGRGGPEGPG
GGGSLLRCPPGLVSMEGTTLAPPGSTSLSSSRKRAYPEASQNHHPSSSFSTSCSKVSKIS
KSGTGAAGTTSLSFPFFPPCPSPVLQCVSSGLQLYG
NT seq 2271 nt   +upstreamnt  +downstreamnt
atggtctcaccatcgaagaagtcgtggtttcctgtgcaataccgacgtcacatccgcttt
ctcgatgcccaacgttggagagcaatggcggcgtgccggggatcttcgtcgaaatggttc
ttcacccgggagcagctcgaaaatacgccgtcccgccgatgtggagtagaaccagaccgg
gagctctcctaccggcaacaagcggcgaatctgatccaagatatgggtcagagactcaac
gtctctcaattaacaataaatacagccattgtttacatgcatagattttatatgcaccac
tctttcaccaaattccataggaatataatctctccaaccaccttattcttggccgcaaaa
gtggaagaacaacctcggaaactcgaacatgtgatcaaagttgcacatgcttgcctaaat
ccccaagaaccgcctctagacacaaaaagcaatgcatacctccagcaagctcaagagctg
gtgatacttgaatccatagtgctgcaaaccctgggctttgaaattactattgatcaccca
cacactgatgtggtgaaatgttcccagctagtgcgagcaagcaaggatctggcacagact
tcctatttcatggctaccaacagtctacacctcactaccttctgcctccagtacaagccc
acggtgatctcctgtgtgtgcatccacctggcgtgtaaatggtccaactgggagatccca
gtttccactgatggaaaacactggtgggagtacgtggacaactctgtcactcttgaactg
cttgatgagttgacccatgagtttctgcagattttggagaagacgcccagccggttaaag
aggatacgcaactggagggcaacacaagctgccaaaaagcccaagactgagggcgctcag
ttgacagacaactcctttgctgggccttccatgctccaagatcaagctgatgcctcactc
gctggagtctcctccaacccaagtttttccaaagcaggtgccgccttcactgtgcccatg
cctggccagtccggaggtgcacccctgtctctggacaccttggctggcacatacaatcca
gctagccacagcgagtggccccagggcaatcagagcctagcagggtacccttccacctgt
ttaaggcaggaccctctcagcatccctcaccaagagcccacactgtccttgcagacctcc
acttcctctttgcttcagcatcctccagtatacaggactgagaaaacagtagacttcaac
cttgtcaaacaggaaccaaaaggagctggtgggagcggagtgggcaagcatcagccacca
cctcagtctgcctatttagttcagcctcctccaccacaaccttcttcagctcagaagctg
tctctggacaaatacagagagaaacatgctgcagagttggctgtctctgggcagaaacgt
agtcaggaacagcatggaggagtattggattgcgatgtgaggggggatatgtcgtcttcc
tcctcttctacctatgcaccatcctctacgggccaagtagaccacagaaaacattcacag
ccccaccaatcatcccatggcggtggtggcagcaccactgcctccccaatgaaaatgaaa
gtcccctcctcaacttcagggcaagatagacgtcatcacggtgacaaacgggacaaaggc
tcgcttaaactccgccttgctgttcctgggtctggtggcagctcccagctggataaaagt
ggacaaccaaataaagatgagcttaagatgaagataaaagtttcatcatcagaacgccac
agctcatcagatgaaggcatggcgtccaacaacaacaagagtaaacattccagtcctctg
gtgagcaaggagaaacaacattatggagcagatcacaacctccatcgccaccacaagcac
agtcaccctcatccacacacacacagcgggaatggacgaggaggcccagagggcccaggt
ggtgggggaagccttctaagatgtcctccaggactggtcagcatggaagggactacgctt
gctcctcccggatccacctctttgtcgtcatcgcgcaagagggcgtaccccgaggccagc
cagaaccaccacccttcctcctcattctccacttcttgctccaaagtgagcaaaatctcc
aagagtggcactggtgctgcaggtactacatctttatctttccccttttttcctccttgc
ccctctcctgtactgcagtgtgtctcgtctggcttgcagctctatggctaa

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