Streptomyces cinnabarinus: STRCI_004147
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Entry
STRCI_004147 CDS
T08957
Symbol
sigM
Name
(GenBank) RNA polymerase sigma factor SigM
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
scir
Streptomyces cinnabarinus
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scir03021
]
STRCI_004147 (sigM)
Transcription machinery [BR:
scir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STRCI_004147 (sigM)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
WAZ22848
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Position
4586022..4586762
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AA seq
246 aa
AA seq
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MDSGSSRADLSDADLLARHVSGDKDAFGEIVRRHRDRLWAVALRTLGDREEAADAVQDAL
VSAYRAAHTFRGQSAVTTWLHRITVNACLDRARKAASRKTSPVDDTERLEQLLEPHESAS
APAERNDLHRQLLEALGTLPPDQRAALVLVDMQGYPVAEAAQLLDVPTGTVKSRCARGRA
RLLPLLTHLRPENAGGGKEASERRNRTEGTSVPPAAGPQGASPRGAGPGDSGPNDSAAVK
GGGGRA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
gtggatagcggatcgagccgagccgatctgtcggacgccgatcttctggcgcgccatgtc
tcgggtgacaaggacgcctttggtgagatcgtgcgccgtcaccgcgaccgcctctgggcc
gtcgccctgcgcacgctgggcgaccgcgaggaggccgctgacgccgttcaggacgcgctg
gtctccgcttaccgggccgcccataccttccgcggccagtcggccgtcacgacctggctg
caccggatcacggtgaacgcctgtctcgaccgggcgcgtaaggcggcctcccggaagacg
tcccccgtcgatgacaccgagcggctggaacagcttctggagccgcatgagtcggcttcg
gctccggccgagcgcaatgatctgcaccggcagttgctggaggcgctcggcacgcttccg
cccgatcagcgggccgcgctcgtcctggtcgacatgcaggggtaccccgtcgccgaagcg
gcccagctcctcgatgtgcccaccggaacggtgaagagccggtgcgcgcgaggcagagcc
agactgctcccgctcctcacccatctgcggccggaaaacgccggtggcggcaaggaggcg
agcgagcgacggaaccgcacggaggggacatccgtcccaccggcagcgggtccgcagggc
gcgagtccgcgtggagccggtcccggggactccgggcccaatgattcagctgctgtgaag
ggcggaggtgggcgagcgtga
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