Streptomyces cinnabarinus: STRCI_004537
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Entry
STRCI_004537 CDS
T08957
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
scir
Streptomyces cinnabarinus
Pathway
scir00550
Peptidoglycan biosynthesis
scir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
STRCI_004537 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scir01002
]
STRCI_004537 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scir01011
]
STRCI_004537 (dacB)
Enzymes [BR:
scir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
STRCI_004537 (dacB)
Peptidases and inhibitors [BR:
scir01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
STRCI_004537 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
scir01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
STRCI_004537 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Peptidase_S11
Beta-lactamase2
Peptidase_M17_N
Transpeptidase
DUF2786
Motif
Other DBs
NCBI-ProteinID:
WAZ23208
LinkDB
All DBs
Position
5010832..5012409
Genome browser
AA seq
525 aa
AA seq
DB search
MVVPELRPWRAARPRLARIAGAVRPRLARAATAGRPRLARLGRTVSAQVTRPKTWQYTAG
AATAGLALAVGVVTAAGPWDSSGQRTAERDRAAAQEGTGGADHGRSSDTAAKAPGPAPSA
ASVLTGLGGAAGRVKAAPGSKALSTLLDPLLDVPALGARHSAAVVDVTTGKRLYGAGADT
ALTPASTTKIATAAAALSALGPDHRLTTRTALEPDTKELVLVGGGDPTLTAREDAEGLAS
LRTLAEDTAAALKKDGVREVTLSYDTTLYAGEELHPIGVNDNLAPVSALMADEARTDDST
SGPVPRVSEPAAEAARTFADLIEDHGIRTTSPGPSKATARAETLAEVSSPPLSALVERML
TNSDNDIAEALARHTAIATGERPDLTGAGRAIRAELNKLGLPVKGTEFKDGSGLNRDNRL
TADLLTALLAQSGDPARPELRPILTGLPVAGFTGTLTSRYADGAAGVVRAKTGTLTGVNA
LAGTAVDSDGHLLAFAFLATDTTNPAEAQSALDKAATALAGCGCS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgtgccagagctgaggccttggcgagccgcgagaccgcggctggcacggatcgcg
ggcgccgtacgaccgcgtctcgcacgggcggccacggccggacgaccgcgcctggcaagg
ctcggccgaaccgtctcggcacaggtcacaaggccgaagacctggcagtacaccgccggc
gccgccaccgcgggcctcgcgctggccgtcggggtggtgaccgccgccggtccctgggac
tcctcgggtcagcgtacggccgagcgcgaccgggcagccgcccaggagggcacgggtggc
gcagatcacggccgtagttccgatacggcggccaaggcacccggccctgctccgagcgcc
gcatccgtcctcaccggcctcggcggagccgccgggcgggtgaaagcggcacccggcagc
aaggccctgtccaccctcctcgacccgctcctggacgtccccgcgctcggcgcccgccac
tccgccgccgtcgtcgacgtgaccaccggcaagcgcctgtacggcgccggcgccgacacc
gcgctcacccccgcctccaccacgaagatcgccaccgccgccgcggccctgtccgccctc
ggccccgaccaccgcctcaccacccgcaccgccctggaaccggacaccaaggaactcgtc
ctcgtcggcggcggcgaccccaccctcaccgcccgcgaggacgccgaaggcctcgcgagc
ctgcgcaccctcgccgaggacaccgccgccgccctgaagaaggacggcgtgcgcgaggtg
accctgtcgtacgacaccacgctctacgcgggcgaggagctccacccgatcggggtcaac
gacaacctcgcgccggtcagcgccctgatggcggacgaggcccgcaccgacgactccacc
agcgggcccgtgccgcgggtgagcgaaccggcggcggaggcggcccgtaccttcgccgac
ctgatcgaggaccacggcatcagaacgacctcgcccggcccctccaaggcgacggcccgc
gccgagaccctcgccgaggtttcctcgccgccgctgtcggccctcgtcgagcgcatgctc
accaacagcgacaacgacatcgccgaggccctcgcccggcacaccgccatcgccaccggc
gaacgccccgacctcaccggcgcgggccgcgcgatccgcgccgaactcaacaagctcgga
ctgcccgtgaagggcaccgaattcaaggacggcagcggcctcaaccgcgacaaccgcctc
acggccgacctgctcacggccctgctcgcacagtccggcgaccccgcccgtcccgaactc
cgcccgatcctcaccggcctgcccgtcgcgggcttcaccggcaccctgaccagccgctac
gcggacggcgcggccggcgtcgtacgcgccaagaccggcaccctgaccggcgtgaacgcc
ctcgcgggcaccgccgtcgacagcgacggccacctgctggccttcgccttcctggccacc
gacaccaccaacccggcagaggcccagtcggcgctggacaaggcggcgaccgccctggcg
gggtgcggctgcagctga
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