Spiroplasma cantharicola: SCANT_v1c08110
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Entry
SCANT_v1c08110 CDS
T04084
Symbol
cbf
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
scj
Spiroplasma cantharicola
Brite
KEGG Orthology (KO) [BR:
scj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scj03019
]
SCANT_v1c08110 (cbf)
Messenger RNA biogenesis [BR:
scj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SCANT_v1c08110 (cbf)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ALD66717
UniProt:
A0A0M4JXA4
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All DBs
Position
complement(957147..958136)
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AA seq
329 aa
AA seq
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MINEINADSKIVTLIARIEKAILSTGNNGANYLILNLVDMTGRIEARLWNSTEKDLDELK
TGLIVKIEAVTNVYRQQLQLKVNSYEIINEGDYQKHSINEEMFSISAPINVKTNYVKLVD
FINSLENKTYKTITLEILKQYEVEFKTFPAAVSIHHNVVGGLFWHSFSLLMGAKALREVY
KYADIDWELVYCGTILHDIGKVLEMAGKNASEYTDQGKLLGHISIGNTFVSNKAIQLGLQ
DNEDVLKLQHAILASHGKNEYGSPVEPLLIEAVIISSLDSLDARIYKINDELSKVEEGAW
TSRILSEDGRSYLNHIKKRNKSKSSKIKT
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgattaatgaaattaatgcagatagtaaaatagttactttaatagctagaatagaaaaa
gcaattttatcaacagggaataatggagctaattacttaattttaaatttagttgatatg
actggaagaatcgaagcaagactttgaaattctactgaaaaagatctagatgaattaaaa
acaggcttaattgtaaaaatagaggctgttacaaatgtttatagacaacaattacaatta
aaagttaattcatatgaaattattaatgaaggtgattatcaaaagcatagtataaatgaa
gaaatgtttagtattagtgctccaattaatgttaagactaattatgttaaattagttgac
tttataaacagtcttgaaaataaaacttataaaacaataactttggaaattttaaaacaa
tacgaagttgaatttaaaacatttccagctgctgtaagtattcatcataatgtagttggt
ggtttattctgacatagtttttctttattaatgggtgcaaaagcactaagagaggtttat
aaatatgcagatattgactgagaattagtatattgtggcacaattcttcatgatatagga
aaagtacttgaaatggcaggtaagaatgcttcagaatatactgatcaaggtaaactatta
ggtcatatctcgataggtaatacatttgtctcaaacaaggcaatacaactgggtttacaa
gacaatgaagatgtattaaagctacaacatgcaatattagcaagtcatggtaaaaatgag
tatggttcacctgtagaacctttattaattgaagcagttattatttcttctttagattca
ttagatgcaagaatttataaaattaatgatgaactatccaaagtagaagagggagcttga
acttcaagaattctttctgaagatggtagaagctatttaaatcatattaagaaaagaaat
aaaagtaaatcttcaaaaataaaaacataa
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