Sorangium cellulosum So ce56: sce0629
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Entry
sce0629 CDS
T00634
Name
(GenBank) RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
scl
Sorangium cellulosum So ce56
Pathway
scl02020
Two-component system
scl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
sce0629
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
sce0629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scl03021
]
sce0629
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
scl02035
]
sce0629
Transcription machinery [BR:
scl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
sce0629
Bacterial motility proteins [BR:
scl02035
]
Flagellar system
Flagellar assembly proteins
Stator
sce0629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
DUF6362
Motif
Other DBs
NCBI-ProteinID:
CAN90786
UniProt:
A9GVP1
LinkDB
All DBs
Position
complement(897539..898177)
Genome browser
AA seq
212 aa
AA seq
DB search
MAALPLARRVARATARIYGVRTRQGIEDCEQTAYQALLEAGLGFDETRGVPLGIYAWKRV
AGAVMRQLTRDVPIRRAGAAAALDAAESVRDTGDPFSDDDDDASGQLMGHCRTLVFARFV
GDAGERRRAHPEDALARTRAFEALAGALRGLDEREARLIELRYWQELSWAQVAAALGVHE
KYATRMDEQLRKRLRGDLQASHVEEPPPSERT
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctccccctcgctcgccgcgtcgccagggcgaccgcgcggatctacggcgtg
cggacgcgccagggcatcgaggactgcgagcagacggcctaccaggccctcctggaagcc
gggctcgggttcgatgaaacacgcggcgtccccctcggcatctatgcctggaagcgggtc
gccggcgccgtgatgcggcagctgacccgcgacgtgccgatccggcgcgccggcgccgcc
gccgcgctcgacgcggccgagtcggtgcgcgacaccggcgatccgttcagcgacgacgac
gacgacgcgtcgggccagctcatgggccattgccggacgctcgtcttcgcccgcttcgtg
ggggacgcgggcgagcggcgcagggcgcacccggaagacgcgctcgcgcgcacgcgcgcc
ttcgaggcgctcgccggggcgctccgcggcctcgacgaacgggaggcgcgcctcatcgag
ctgcggtactggcaggagctctcgtgggcccaggtcgccgcggcgctcggcgtccacgag
aagtacgcgacccgcatggacgaacagctgcggaaacgcctccggggcgatcttcaggcg
agccacgtcgaagagccgccgccgagcgagcggacatga
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