Streptomyces clavuligerus: BB341_18550
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Entry
BB341_18550 CDS
T04717
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sclf
Streptomyces clavuligerus
Brite
KEGG Orthology (KO) [BR:
sclf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclf03019
]
BB341_18550
03009 Ribosome biogenesis [BR:
sclf03009
]
BB341_18550
Messenger RNA biogenesis [BR:
sclf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BB341_18550
Ribosome biogenesis [BR:
sclf03009
]
Eukaryotic type
Pre-60S particles
RNases
BB341_18550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ANW20069
UniProt:
B5H1M6
LinkDB
All DBs
Position
complement(4564728..4565330)
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AA seq
200 aa
AA seq
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MNDRMVWIDCEMTGLSLTDDALIEVAALVTDSELNVLGEGVDIVIRPPDAALATMPEVVR
QMHTASGLLDELAGGTTLADAEERVLAYIREHVREPGKAPLCGNSVGTDRGFLSRDMPAL
ESWLHYRIVDVSSVKELARRWYPRAYFNSPEKSGNHRALADIRESIAELRYYREAVFVLQ
PGPDSETARTIAAKHVLPAE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccgcatggtgtggatcgactgcgagatgaccgggctctcgctgacggacgac
gcactcatcgaggtggccgcgctggtcaccgactcggaactgaatgtgctcggcgaaggg
gtggacatcgtgatccgccccccggacgcggccctcgcgaccatgcccgaggtggtgcgg
cagatgcacaccgcctcgggcctgctcgacgagctggcgggcggcaccacgctcgccgac
gccgaggagcgggtgctcgcctacatccgggagcatgtgagggaaccggggaaggctccg
ctgtgcgggaactcggtgggcacggaccgcggcttcctgtcgcgggacatgcccgccctg
gagagctggctccactaccggatcgtggacgtctcctcggtgaaggagctggcccgccgc
tggtacccgagggcctacttcaacagtccggagaagtccggcaaccaccgggcgctcgcg
gacatccgcgagtcgatcgccgagctgcggtactaccgggaggcggtcttcgtactgcag
cccggaccggactcggagacggcgaggacgatcgcggcgaagcacgtgctccccgcggag
tga
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