Streptomyces coelicolor: SCP1.116
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Entry
SCP1.116 CDS
T00085
Name
(RefSeq) ecf family sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sco
Streptomyces coelicolor
Brite
KEGG Orthology (KO) [BR:
sco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sco03021
]
SCP1.116
Transcription machinery [BR:
sco03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCP1.116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
HTH_16
Sigma70_ECF
Motif
Other DBs
NCBI-GeneID:
1095194
Kitasato_p1:
SCP1.116
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All DBs
Position
SCP1:110011..111153
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AA seq
380 aa
AA seq
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MQQSAPPPAVHGLTDDRMRTTVPVRRQMSGLPTSPPRPTTASAASPVTVLVDRARNGDRE
AFGLLYGHYRPQIYTYLMRRTCDRPLSEDLTGDVFVRALTRINAFTWRGTDFGAWLSTIA
RNLLVDHYKSARTRREVPTGDMYDQDVRVGDIGAHVTESMARADVLAELRKALARLTPDQ
WECLRLRYWDNLPFCEVGQRMDRSTGAAKILKDRALRSLSAPDVKAALLQAPSDSSNAPS
SQASPHVPSPRRPAPDDVTTPGKADAMATPHAAPSALTTAQAVALVLLRDGFTERSITQR
TGVPGDSLYRLAAAHGIAAPHGTVEGHRCHEAADTEPCDGCSLADARDQARTRARHRRTV
SSLPRPLRRQATGRRRRTAR
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagtctgctcccccgccggccgtccacggcctgacggacgaccgcatgcgcacc
accgtcccggtccgccggcagatgtccggcttacccacgtcgccgccccgtcccacgacg
gcatcagcggcatcgcccgtgacggtcctggtcgaccgcgcgcgcaacggcgaccgcgaa
gcgttcggtctcctgtacggccactaccggccgcagatctacacctacctgatgcgccgc
acctgcgaccggccgctgagcgaggacctgaccggtgacgtgttcgtgcgggccctcacc
cggatcaacgcgttcacctggcgcggcaccgacttcggagcctggctgtccacgatcgcc
cgcaacctcctggtcgaccactacaagagcgcccggacccggcgggaggtcccgaccggc
gacatgtacgaccaggacgtgagggtcggggacatcggcgcccacgtcaccgagtccatg
gccagggccgacgtcctcgccgagctccgcaaggctctggccaggctgacccccgaccag
tgggagtgcttgcggctgcgctactgggacaacctgccgttctgcgaggtcggccagcgc
atggaccgcagcaccggagcggccaagatactcaaggaccgtgcgctgcggagcctcagc
gccccggacgtcaaggccgcgctcctccaagcgccctccgactcctccaacgccccctcc
tcgcaggcttccccgcacgtgccgtcaccgcgccggcccgcgcccgacgacgtcacgacc
cctggaaaggccgacgccatggcgactcctcacgccgcgccgtccgcgctcacgaccgct
caagccgtggcgctggtcctgctgcgcgacggcttcaccgagcgcagcatcacccagcgc
acgggcgtgcccggcgattccttgtaccggctcgccgccgcccacggcatcgccgccccg
cacggcaccgtggaaggccaccgctgccacgaagccgccgacaccgagccgtgcgacggg
tgcagcctcgccgacgcccgggaccaggcccgcacacgagcccggcaccgcaggaccgtc
agctccctgccgcggcccctgcgccgccaggccaccgggcgcaggaggaggacggcacga
tga
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