Salinivibrio costicola: HBA18_01035
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Entry
HBA18_01035 CDS
T06511
Name
(GenBank) PadR family transcriptional regulator
KO
K10917
PadR family transcriptional regulator, regulatory protein AphA
Organism
scot
Salinivibrio costicola
Pathway
scot02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HBA18_01035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scot03000
]
HBA18_01035
Transcription factors [BR:
scot03000
]
Prokaryotic type
Helix-turn-helix
PadR family
HBA18_01035
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vir_act_alpha_C
PadR
TrmB
HTH_34
Motif
Other DBs
NCBI-ProteinID:
QIR05086
LinkDB
All DBs
Position
1:complement(209480..210040)
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AA seq
186 aa
AA seq
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MSLPHVILTVLSNCEATGYDITKAFSTSISYVWKASHQQVYRELTKLAEKGAVSCRLEPQ
MGKPDRKVYAITPVGTDMLQTWLLSEPKLAPERDEYVARLLSCEVLDPSPMLGHVNQLIA
ESQQLLNHYAMIEQREFGQASPLTNQQRLLRLALRRTIHQRRAWLAWAQEVRDELAMLAP
REPCSA
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgtcactaccccatgtaatactgacggtgctaagcaactgcgaggccacgggttacgat
attaccaaggcgttttccactagcattagctatgtatggaaagccagccatcagcaagtg
tatcgcgagcttaccaagctcgcagaaaaaggggcggtgagctgccgcttggagccacag
atgggtaagcccgatcgcaaggtctatgccattacgccggtcggcactgacatgttgcaa
acttggctactcagtgagccaaaacttgcccccgaacgggatgagtatgtcgcacgtctg
ttgagctgtgaagtgctcgacccatcccccatgctaggtcatgttaatcagttaattgcc
gaatcgcagcaactcctcaaccattacgccatgattgagcaacgcgaatttggtcaagcc
agcccgcttaccaatcagcagcgcctgctgcgtttagccttgcgtcgtaccattcatcaa
cgtcgcgcttggctggcttgggcacaagaggtacgcgacgaattagctatgctagcgcct
cgcgagccttgctcggcataa
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