Salinivibrio costicola: HBA18_11200
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Entry
HBA18_11200 CDS
T06511
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
scot
Salinivibrio costicola
Pathway
scot00550
Peptidoglycan biosynthesis
scot01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HBA18_11200 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scot01002
]
HBA18_11200 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scot01011
]
HBA18_11200 (dacB)
Enzymes [BR:
scot01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HBA18_11200 (dacB)
Peptidases and inhibitors [BR:
scot01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
HBA18_11200 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
scot01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
HBA18_11200 (dacB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
DUF2740
DUF2800
Motif
Other DBs
NCBI-ProteinID:
QIR07400
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All DBs
Position
1:2392121..2393524
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AA seq
467 aa
AA seq
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MVLVGVLLISALSPALSQSLRVEQLTPVLPQGSQLALWVSDVKTNHPQVALQADALLPPA
STQKLVTGLAARLYLPETFRFSTRLVQAGDDIALVFSGDPLLTRKDLRQLLRQLPARGLT
TINNVFLDGHIFSGKSRAVGWPWDILAVCYSAPSTSIALNHNCVQGAIYSTPDAEHTRVH
VPSHQPITVTTEARAVSEEQKDTAHCDLDLTATPRNHYRFSGCLAHRERPLPLNFAVQNP
PAYVKAIIADELARLGVKVTGNIVQARTPNQARELARHDSVNLEALLTRMIKDSDNLIAD
NLLKTVGQRYFQQPGSYRNGVAAVKAILAKKGLDLTHAIMVDGSGLSRNNRLSARQLSEV
VHYILTHPELGLKAMLPIAGIDGTLKYRQSVRRAPIKGRLFAKSGSLYGSHNLAGFIETD
DNQQQIVVQLVSHYHPDDEALPDNVPAPITQFERELYQALIHRRLLP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
attgtactggttggcgttttattgatcagcgccctttcgcccgccctttcgcaatcactg
cgcgttgaacagctcactccagtcctcccccaagggagccaactggcattgtgggtaagt
gatgtcaaaaccaatcatcctcaagttgccttgcaagcggatgcattactgccgccagcc
agcacgcaaaagctggtaaccggtctcgccgctcgcttatatctgccagagacctttcgt
ttttctactcggttagtccaagctggtgatgatattgcactggtgtttagcggtgatccg
ctgctcacacgcaaagacttgcgccaactacttcgccagctgcccgcacgagggctcacc
acgattaataacgtctttttagatggtcatatctttagcggtaaatcacgcgccgttggc
tggccgtgggatattctcgctgtatgttatagcgctccctcgacgtccattgcgctcaat
cacaattgtgtgcaaggcgcgatatacagcacaccagacgccgagcatacccgtgtccat
gttcctagccatcaaccgatcacagtgacgactgaagctcgagcggtcagtgaagagcaa
aaagacacggcacactgtgacttagaccttaccgcaactccccgcaatcattatcgtttt
tctggctgtttggcccatcgagagcgaccgctgccgctcaattttgccgtgcaaaatccg
cccgcttatgtgaaagcgataattgccgatgaattagcccggctcggcgtcaaagtaaca
ggcaatattgtacaggcgcgcactccaaaccaagcccgagagctggcgcgtcacgactcc
gtcaacttggaagccttgctaacccgcatgataaaagactcggataacttaattgcggac
aacctgctgaaaacagtcggccagcggtattttcagcaaccagggtcgtaccgaaatggt
gtggcggcagtgaaagcaatcctcgccaagaaagggctggatcttacccatgccatcatg
gttgatggctcagggctatcgcggaataatcgtttaagtgcacgccagctttctgaggtg
gtgcactatattctcacccacccagaattaggcctcaaagcgatgctgcccatcgccggg
attgatggcaccttaaaataccgccagagtgtgcgtcgcgcgcccatcaaagggcggtta
tttgcgaaaagcggttcactttacggcagtcataatttggcagggtttattgaaactgac
gacaatcagcaacaaattgtggtacagctggttagccactaccaccctgatgacgaggcc
ttgccagataacgtgccagcccccatcactcagttcgagcgagagctttatcaggcgctg
atccatcgccgtctgctgccttaa
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