KEGG   Shewanella cyperi: JYB88_09695
Entry
JYB88_09695       CDS       T07829                                 
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
scyp  Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:scyp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:scyp02048]
    JYB88_09695
Enzymes [BR:scyp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     JYB88_09695
Prokaryotic defense system [BR:scyp02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   JYB88_09695
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N ResIII DUF87 RNA_helicase AAA_22 Viral_helicase1 SNF2-rel_dom
Other DBs
NCBI-ProteinID: QSX28575
UniProt: A0A975AJ02
LinkDB
Position
complement(2236613..2239924)
AA seq 1103 aa
MKFTEASLEAAIIQLLGEQGYDHVDGASLARTPEQVLLVDDLVCYLTNRYAEPYAEEALT
PAEIRRIIGMLEALPAGDLYESNKQFCRWLADGFTFKRDDPTAKDMRIQLLDYMGLEHLG
LEHLWTQATLSDAQQNQIAEMSASYALAAGDAGVERHDDSNIYKLVSQLEIEGIDGKRIP
DVILYINGLPLVVFEFKSAIREEQANIHQAWHQLTSYYRRDIAPLFVFNAFCVISDGVNN
KMGSLFAPYEFFYGWRKVTGCESVEKDGIDSLFTMINGLFDKARLRLVLRDFIFFPDVSN
REEKLVCRYPQFYAVNKLYHSVHRAQKRIGPEGELIGGDGKGGTYFGATGCGKSYTMQFL
ARRLMKSQALASPTIILITDRTDLDDQLSKQFTNAKHYLKDQTVVTVTSREDLRAQLKGR
SSGGVFLTTIHKFSEDTELLTERSNVICISDEAHRSQINLEQKVVIDDDKGTVRKSYGFA
YHLHQSLPNATFVGFTGTPIDATLDVFGAVVDSYTMSESVNDEITVRIVYEGRAAKVLLD
ETKLQEIERYYDDCAEQGANEHQIEESKKTMASMGSILGDKDRIAAIARDFAAHYQQRVD
EGSTIKGKAMFVSSSREIAFSFYNALKEIKPEWFEVRAAAEGEQLTDKDNVKPLPMVNMV
MTSSKEDGNQLRDLLGNKEYRKELDRQFKHPKSNFKIAIVVDMWLTGFDVPFLDTLYIDK
PVQRHNLIQTISRVNRKFEGKDKGLVVDYIGIKRQMNQALAMFSKADEANFEDIDASVAV
VKDHLDLVGQLMHGFDERDYFSGDPVEQLHCLNRAADFVLTKESMQRRFMALMKRLKAAY
DVCCGSERLSQAERDLIHLYLAVRSIIYKLTKGEAPDTAQMNTKVRQLIEEAIRADGVEE
IFHLGAEGAEQIDIFDEDYLARLDKLKLPNTKIELLKKMLAKALAEFKKTNQLKAVEFSS
KLRSLVDHYNERKEEDAFTTEVHQEAVDSLLALMADIKVEMGSFADLGISVEEKAFYDIL
KHVASKYQFAYEDARLLELAAKVKAVVDDKASYPDWNNRDDIKSALKVELIMLLSKNGYP
PVTYNEVYQDVFAQAENFKANRV
NT seq 3312 nt   +upstreamnt  +downstreamnt
atgaaatttacagaagccagcctggaagcggcgattattcagttgttgggcgagcagggc
tatgaccatgttgatggcgccagcctagcgcgcacgccagagcaagtgttgctggtggat
gacctcgtttgttatctgactaatcgctatgccgagccctatgccgaagaagccctgact
ccagccgagattaggcggattatcgggatgctggaagccttgcctgccggtgacctgtat
gagtcgaacaagcagttttgccgctggttggctgatggttttacctttaagcgcgacgat
ccgaccgcgaaggatatgcgcattcagctgctcgattatatgggcctggaacatctgggg
ctggagcatttgtggacgcaagcaactttgtcggatgcgcagcaaaaccagattgctgaa
atgagcgccagctatgcccttgctgcaggtgacgctggggttgagagacacgatgacagc
aacatctacaagctggtgagccagctggagatagagggcattgatggtaagcgcatcccg
gatgtaattttgtatatcaacggcctgccgctggtggtgtttgagtttaaaagtgccatc
cgtgaagagcaggccaatatccatcaggcctggcatcagctgacctcttactatcggcgc
gacattgccccgctgtttgtgtttaacgccttttgtgtaataagcgatggggtaaacaac
aagatgggcagcctgtttgcgccctacgagttcttttatggctggcgcaaggtgacgggc
tgtgaatcggtagagaaagacggcatcgactcgctgtttaccatgattaacggcctgttt
gacaaggcgcggctgagactggtgctgcgggactttatcttcttccccgatgtgtcgaac
cgtgaagaaaagctggtgtgccgttacccacagttttatgcggtgaataagctctatcac
agtgtgcaccgggcgcaaaagcgcatcggccccgagggggaattaataggcggtgatggc
aagggcggcacctactttggtgccaccggctgtggcaagagctacaccatgcagtttttg
gcgcgccggttgatgaaaagccaggcactggcgagcccgactattatcttgattaccgat
cgcaccgatttggatgatcagctctccaagcagttcactaatgccaagcactatctgaaa
gatcagacagtagtgactgtgaccagccgcgaggatttacgcgcccaacttaagggccgc
agcagcggcggggtgttccttaccaccattcacaagttcagcgaagataccgagcttttg
actgagcgcagcaatgtgatttgtatttcggacgaggcccaccgcagccagataaacctg
gagcaaaaggtggtgatcgacgatgacaagggcaccgttcgcaagagctacggctttgcc
taccatctgcaccagtcgctacccaacgccacctttgtcggctttaccggcaccccgata
gacgcaacgttggatgtgtttggcgccgtggtggacagctacaccatgagcgagtcggtg
aatgacgagatcacggtgcggattgtgtacgaaggccgcgccgccaaggtgcttttggat
gaaaccaagctgcaggagattgaacgctactatgacgactgcgccgagcagggcgccaat
gagcaccagatagaagagagcaaaaagaccatggcctccatgggctctattctgggggac
aaagaccggattgcggccattgcccgcgactttgccgcgcattatcagcagcgtgtggat
gaaggctcgaccatcaaaggcaaggcgatgtttgtctccagcagccgtgagattgccttt
agcttttacaatgccctgaaagagattaagcccgagtggtttgaggtgagggcggccgcc
gagggcgagcagcttaccgacaaagacaatgtgaagcccttgcctatggtgaacatggtg
atgaccagcagcaaggaggatggcaaccagctcagagacttgcttggcaacaaggaatac
cgcaaggagctcgaccggcagtttaagcaccctaaatccaactttaaaatcgccattgtg
gtggacatgtggctgaccggctttgatgtgccgtttctggacaccctgtacatcgacaag
ccagtgcagcggcacaacctgattcagaccatctcgcgggtgaaccgcaagtttgagggt
aaagataaggggctggtggtagattacattggcattaagcggcagatgaatcaggcgctg
gcgatgttttccaaggccgatgaagccaactttgaggacatagatgcctcggtggcggtg
gtgaaagaccatttggatttggtcggccagctgatgcacggctttgatgagcgcgattac
tttagcggcgacccggtggaacagctacattgcctaaaccgcgccgccgactttgtgctg
accaaagaatcgatgcagcggcgctttatggcgctgatgaagcgcttaaaggcggcttat
gatgtgtgctgcggctccgagcggttatcgcaggccgagcgcgacctcattcatttgtat
ctggcggtgcgctctatcatctacaagctgaccaagggcgaggcgcccgatacggcgcag
atgaacactaaggtcaggcagctgattgaagaggcaatccgcgccgacggggtggaggag
attttccacctgggggcagagggcgccgagcaaatcgacatcttcgatgaggattatctg
gcgcggctcgataagcttaagcttcccaacaccaagattgagctcctaaaaaagatgctg
gccaaggcgctggcggaatttaaaaagaccaaccagcttaaagccgtggagttttcgagc
aagctgcgttccttggtggaccactacaatgagcgcaaagaggaagatgcctttaccacg
gaggtgcatcaggaagcggtagacagcctcctggcgttgatggccgacatcaaggtggag
atggggtcgtttgctgaccttgggatcagcgtggaggaaaaggcgttttacgacatcctc
aagcacgtggcgagcaagtatcagtttgcctatgaggacgcgcgcctgctggagcttgcc
gccaaggtgaaagccgtggtggatgacaaggccagctaccctgactggaataaccgcgac
gacattaaatcggcactcaaagtagagctgattatgctgctgtcgaaaaacggctacccg
cccgtgacctataacgaggtgtaccaggacgtgttcgcccaggccgagaactttaaagcg
aatagggtgtag

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