Saccharophagus degradans: Sde_1108
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Entry
Sde_1108 CDS
T00335
Name
(GenBank) chemotaxis sensory transducer
KO
K03406
methyl-accepting chemotaxis protein
Organism
sde
Saccharophagus degradans
Pathway
sde02020
Two-component system
sde02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sde_1108
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Sde_1108
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sde02035
]
Sde_1108
Bacterial motility proteins [BR:
sde02035
]
Flagellar system
Chemotaxis proteins
MCPs
Sde_1108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
ATG17_like
HMMR_N
GIT1_C
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ABD80370
UniProt:
Q21LQ9
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All DBs
Position
1432992..1434611
Genome browser
AA seq
539 aa
AA seq
DB search
MGNMSIRRQILALGIGSMLAVGLVAMVAFIMLNRQVEHYQHLLDEQYAVALEADKTVLAF
KRQVQEWKNVLLRGHDASNLNKYWGRFEEHQRDIQSSAIAIANSDVPPQARAKIQAFQAE
HKAIFSKYQAGKQAFISSGYDHKAGDRAVSGIDRQPTKDLEEASEIITAAANDKAKQLAA
TTKKVFFTAGAALVSMMILVALAAAYIGSNKIAKPISEMVRHLDLLVRGNFSSRVDYWGQ
DEMGRMADGIRTLQAKLQGSTDKLSAVTNSLHAASESMEGVAKSIQTGTTSQYSRTEHSA
SAMTELSCTAKEVAKHASDAKRLSDQADEAAVDGEKVMNEAISTMHQMKDQIANTAGVIM
SLEEDTSEVGKVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRTQE
STAEIHQMIVNVQSGAHGAVSAIEAGGAQSEDTMEKLTKAGAKLQDIRHCIDQMTGVNQL
IASAAQEQAHVSEDITQAITDIANIANDSAKQAGEVSAMTATMRKSCDELQLVVAELKS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatatgagtatacggcgccaaattctggcgctgggtatagggagcatgctggcc
gtaggcttggtggcaatggttgcgtttattatgctcaaccgccaggtcgaacactaccag
caccttttggatgagcaatacgctgtagcgctggaggctgataaaacagtcttggcgttc
aagcggcaggtgcaagagtggaaaaacgtgttgttacgtggccatgacgcatccaattta
aataaatactgggggcgctttgaggagcatcagcgcgatattcaatcatctgcaatcgct
atagccaacagtgatgtgccgccgcaagctagagccaaaatacaagcatttcaggctgag
cacaaagctattttctccaaataccaagcgggcaagcaggcatttatctcttctgggtat
gatcataaggccggtgaccgtgcagtaagtggaatagatcggcagccgacgaaagacctc
gaagaagcctcagaaataattaccgctgcggcaaacgataaagccaaacagctagcggca
accaccaaaaaagtgttttttactgctggggcagcgttagtttcaatgatgatcttggtt
gccttggcagcagcctatattggcagtaataaaatagctaagccaatttccgagatggtc
aggcacttagatttacttgtgcgaggcaatttttcttcgcgggtagattattggggccaa
gatgaaatgggccgaatggcagatggtattcgcactttgcaagcaaagctgcaaggctct
acggataagctaagtgcggtaaccaactcattacatgcagccagtgaatccatggagggg
gtggcaaaaagtattcaaacgggcacgaccagccaatactcacgcaccgagcattcagcc
tccgcaatgactgagctttcctgcactgcgaaggaggtagccaaacacgcttctgatgcg
aaacgcctctccgatcaagccgatgaggccgcggtggacggtgagaaagtgatgaatgaa
gccatctccactatgcaccaaatgaaagaccaaattgctaatactgccggcgtaataatg
agcttggaagaagataccagcgaagtagggaaagtgctggatgttattcgcggcattgca
gagcaaactaacctactggctttaaatgcggcgattgaagctgcacgcgcgggcgagcag
gggcgcggttttgcggtggttgctgatgaagtgcgcactctcgcgcagcgcacgcaagag
tccacagcggaaattcatcaaatgatagtaaacgtgcagtcgggtgctcacggtgctgta
tcggccattgaggcgggtggcgcacaatcggaagatactatggaaaaactgacgaaagcg
ggcgcgaaattacaagacattcgccactgtatcgatcagatgacgggggtaaatcagctt
attgcttccgctgcgcaggagcaagcgcatgtgtcggaggatattacgcaggcgatcaca
gacattgccaatatcgccaatgattctgccaagcaagccggcgaggtttctgctatgact
gccactatgcgcaaatcatgtgacgagcttcagttagtcgtggcagaacttaaatcttaa
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