Saccharophagus degradans: Sde_2607
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Entry
Sde_2607 CDS
T00335
Name
(GenBank) succinyldiaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
sde
Saccharophagus degradans
Pathway
sde00300
Lysine biosynthesis
sde01100
Metabolic pathways
sde01120
Microbial metabolism in diverse environments
sde01230
Biosynthesis of amino acids
Module
sde_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Sde_2607
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sde01002
]
Sde_2607
Enzymes [BR:
sde01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Sde_2607
Peptidases and inhibitors [BR:
sde01002
]
Metallo peptidases
Family M20
Sde_2607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
BNR_2
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
ABD81867
UniProt:
Q21HG2
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All DBs
Position
3305833..3306981
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AA seq
382 aa
AA seq
DB search
MTNESAHNTPTVKLACDLIAQPSVTPEDAHCQRMMIERLEAIGFKVENLRFGDVDNFWAI
RGESGPILAFAGHTDVVPTGDLGKWATDPFTPTIKDGMLYGRGAADMKGSLAAMITACES
FIAAHPNHTGRIAFLITSDEEGPAINGTVKVVEWLEARNEKIKWCLVGEPSSTTLVGDVI
KNGRRGSLGAELIVKGVQGHVAYPHLAVNPIHMIAPALAEMASETWDNGNEFFPPTSFQV
SNFNSGTGATNVVPGEANVVFNFRFSTELTADILKQRTHAILDKHNVNYDLKWNLSGEPF
LTAEGELVAASVAAIKKITGRDTELSTAGGTSDGRFIAPTGAQVLELGPVNATIHQINEC
VSVDDLNTLSDIYCTMLTELLA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacgaatccgcacacaacaccccaaccgtaaaattagcctgcgacctcattgca
cagccttctgttaccccagaagatgctcactgccaacgcatgatgattgagcgcttagaa
gccattggttttaaagtagaaaacctgcggtttggtgacgtagataacttttgggcgatt
cgcggcgaaagtgggccgatactcgcctttgctggccacacagatgtagtgcctacaggc
gacttgggcaaatgggccacagacccattcaccccaaccattaaagacggcatgctctac
gggcgcggcgccgccgacatgaaaggcagcctggccgccatgattaccgcatgcgaaagt
tttattgcggcccacccgaaccacacagggcgcattgcgtttttaattaccagtgatgaa
gaaggcccagccattaacggcaccgttaaagtggttgagtggctagaagcgcgcaacgaa
aaaataaaatggtgtttggttggcgagccatcaagcactaccttagtgggcgacgtaatc
aaaaatggtcgccgcggttcactaggtgccgaacttatcgttaaaggcgtgcagggccat
gtggcgtaccctcaccttgcggtaaaccccattcacatgattgcaccggcacttgcagaa
atggcgagtgaaacctgggataacggcaacgaattttttccgcctaccagctttcaggtt
tctaattttaacagcggtaccggcgcaaccaatgtggtaccgggcgaagccaatgtggtg
tttaatttccgcttctctaccgagctaaccgcagacattttaaaacagcgcacccacgcc
atattagataagcacaacgtaaactacgatttaaaatggaatttatctggcgagccgttt
ttaacggccgaaggcgagcttgttgctgcatccgttgccgccattaaaaaaattaccggc
cgcgacacagagctgtctaccgctggcggcacatccgacgggcgctttattgcccctacc
ggcgcacaggtattagagctaggcccagttaacgccactattcatcaaataaacgaatgt
gtaagcgtagatgacctaaataccttaagcgacatctactgcactatgcttacagagtta
ctcgcttaa
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