Streptomyces deccanensis: L3078_22920
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Entry
L3078_22920 CDS
T08215
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sdec
Streptomyces deccanensis
Pathway
sdec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L3078_22920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdec03019
]
L3078_22920
Enzymes [BR:
sdec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
L3078_22920
Messenger RNA biogenesis [BR:
sdec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
L3078_22920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Bap31_Bap29_C
Motif
Other DBs
NCBI-ProteinID:
ULR51914
LinkDB
All DBs
Position
complement(5136375..5137823)
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AA seq
482 aa
AA seq
DB search
MPNANEDISALSQVQRRAVSELLRVSPVADDLARRFQEAGFSLALVGGSVRDALLGRLGN
DLDFTTDARPEDVLRIVRPWADAVWEVGIAFGTVGAQKDGYQIEVTTYRSEAYDRTSRKP
EVSYGDSIEDDLVRRDFTVNAMAVALPEKEFIDPHGGLEDLSARVLRTPGTPEASFSDDP
LRMMRAARFAAQLGFEVAPEVVSAMSDMAGRLEIVSAERVRDELNKLILSAHPREGLTLL
VDTGLAEHVLPELPALRLERDEHHRHKDVYDHTLIVLEQAIALEESGPDLTLRLAALLHD
IGKPRTRRFEKDGRVSFHHHEVVGAKMTKKRMAALKYSNDQVKDVSRLVELHLRFHGYGT
GEWTDSAVRRYVRDAGPLLDRLHKLTRSDCTTRNKRKANALSRAYDGLEERIAQLQEQEE
LDAIRPDLDGNQIMEILGVGPGPVIGQAYKFLLELRLENGPMEHDEAVTALKEWWAQASQ
VS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaacgccaacgaagacatcagtgccctgagtcaggtgcagcgccgcgcggtgagt
gaactgctgcgggtgtcccctgtcgccgacgacctcgcccgccgtttccaggaggcgggg
ttctcgctcgccctggtcggtggctcggtcagggacgcgctgctcggtcggctcggcaac
gacctggacttcacgacggatgctcgccccgaggacgtgctgaggatcgtacggccctgg
gcggacgccgtatgggaggtcgggatcgcgttcggcacggtgggtgctcagaaggacggc
taccagatcgaggtcacgacttatcgctccgaggcgtacgaccggacctcgcgcaagccc
gaggtctcgtacggcgactcgatcgaggacgatctcgtacgccgtgacttcaccgtgaac
gcgatggcggtggccctgcccgagaaggagttcatcgacccgcacggcgggctggaggac
ctctcggcgcgcgttctgcgtacccccggtacacctgaggcgtccttctccgacgacccg
ctgcgcatgatgagggccgcgcgtttcgccgcccagctgggcttcgaggtggctcccgag
gtcgtctcggcgatgagcgacatggccggtcgcctcgagatcgtctcggcggagcgggtg
cgggacgagctgaacaagctgatcctttccgctcacccccgtgagggcctgaccctgctg
gtcgacaccggtctcgccgagcacgtcctgccggagctgccggcgctgcgactggaacgt
gacgagcatcatcggcacaaggatgtctacgaccacacgttgatcgtcctggagcaggcg
atcgcactcgaggagagcggaccggatctcacgctgcggctcgccgcactgctgcacgac
atcggcaagccccgcacgcgtcgcttcgagaaggacggccgggtctccttccaccaccat
gaggtggtgggcgccaagatgaccaagaagcgcatggcggccctcaagtactccaatgac
caggtcaaggacgtctcacggctggtggaactccacctgcgcttccacggatacggcacc
ggtgagtggacggactccgctgtccgccgctacgtgcgcgacgcgggtccgttgctcgac
cgcctccacaaactgacccgctccgactgcaccacgcggaacaagcgcaaggcgaacgct
ctctcgcgggcctacgacgggctggaagagcgcatcgcacagctccaggagcaggaggag
ctggacgccatccgcccggatctcgacggcaaccagatcatggagatcctgggcgtcgga
cccggcccggtcatcggtcaggcgtacaagttcctgctggagctgcgtctggagaacggg
ccgatggagcacgacgaggcggtgacagcgctcaaggagtggtgggcgcaggcgtcccag
gtttcctga
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