Streptomyces deccanensis: L3078_22940
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Entry
L3078_22940 CDS
T08215
Symbol
sigM
Name
(GenBank) RNA polymerase sigma factor SigM
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sdec
Streptomyces deccanensis
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdec03021
]
L3078_22940 (sigM)
Transcription machinery [BR:
sdec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L3078_22940 (sigM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ULR51918
LinkDB
All DBs
Position
5144598..5145311
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AA seq
237 aa
AA seq
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MAHSADHSGASDQDLLARHVEGDSDAFSELVRRHRDRLWAVALRTLGDREEAADAVQDAL
VSAYRAAHTFRGQSAVTTWLHRITVNACLDRARKAASRKTSPVDDTERLEQLLEPHESAS
APAERNDLHRQLLEALGTLPKDQRAALVLVDMQGYPVAEAARILDVPTGTVKSRCARGRA
RLLPLLTHLRADGDGEGGRKSGRGRNRAQGTSVPPAAGAHDAGPSDSAAVKGGGGRA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacagcgctgatcacagcggggcgagcgatcaggatctcctggcccggcacgtg
gagggtgactccgacgccttcagcgaactcgtacggcggcaccgggaccggctctgggcg
gtggcgctgcggaccctgggagaccgcgaggaggctgccgacgccgtccaggacgccctg
gtgtccgcctaccgggccgcccacacctttcgtggccagtcggccgtcacgacctggctg
caccgcatcacggtgaacgcctgcctggaccgcgcccgcaaggccgcgtcccgcaagacc
tcgccggtcgacgacaccgagcgcctggagcagctcctggagccgcacgaatcggcgtcc
gctccggccgagcgcaatgatctgcaccgccagctgctggaagctctgggcactctgccg
aaggaccagcgggcggctctcgtcctggtggacatgcagggctacccggtggcggaggcc
gctcgcatcctcgatgtgccgaccggcacggtgaagagccgctgcgcccgtggcagagcc
agactgctgccgctcctgacccatctcagagcggatggcgacggggagggcggcagaaag
tcggggcgtggaaggaaccgggcgcaggggacatccgtcccacccgcagcgggagcacat
gatgcagggccaagcgattcagctgctgtgaagggcggaggtgggcgagcgtga
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