Shewanella decolorationis: D0436_07000
Help
Entry
D0436_07000 CDS
T09167
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sdeo
Shewanella decolorationis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdeo03400
]
D0436_07000 (phrB)
Enzymes [BR:
sdeo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
D0436_07000 (phrB)
DNA repair and recombination proteins [BR:
sdeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
D0436_07000 (phrB)
Prokaryotic type
D0436_07000 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QDZ90232
UniProt:
A0A5B8QVX7
LinkDB
All DBs
Position
complement(3564244..3565725)
Genome browser
AA seq
493 aa
AA seq
DB search
MSDNQTPATKHALMWFRQDLRLTDNQALTAACDWVRQAPSAKLRAIYIATPSQWLSHDMA
PIQIDFIQRHVNLLAQGLASLGIEFELIQLDSFKEVPAFLAIYCEKLGVERVFAGREPEI
NEQKRDQACLDAGIPLVLSDEHCLLPPGTVLNLSGDMYKVFTPFSRKWREVAAKRAILPL
GVPAPLGPMLPEPKPISFKERFQSTSKLTSSEQWAAGEGQAKRILTTFIEQKAQDYKQDR
DFPALDGTSVISPYLALGVLSPRQCIAALLGRFPEVIVDDTSPGRTWLNELIWREFYRHL
LVAFPDLSKGHNFNRQADHVQWRNNQAEFLAWCEGKTGYPIVDAAMRQLNQIGWMHNRLR
MVVASFLTKHLLIDWRWGERYFRQHLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPISQ
SEKFDPDGRFIRKYLPELASWGVKRLHQPNMQKTPSLFDAPSQPSDSAYPCAIVDHNAAR
ARALAVLGVLKKA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataatcaaactccagcgacaaagcatgcgttaatgtggtttcgccaagacctg
cgcctaacggataaccaagcgctgacggctgcttgtgattgggtgcggcaagcgcctagt
gcaaaacttagggcgatttatattgcgactccgagccaatggctcagccatgatatggcg
ccgatccagattgattttatccagcggcatgtgaatttgctcgcccaaggactcgcaagc
ctagggattgaatttgagcttattcaactcgatagctttaaagaggtgcccgccttttta
gcgatttactgtgaaaagctgggagttgagcgggtgtttgcggggcgagaacccgaaatc
aacgagcaaaagcgcgaccaagcctgtctcgatgccggtattcccttagtgcttagcgac
gagcattgcctattgccgccgggcacagtgcttaatttaagcggtgatatgtataaggta
ttcacgccctttagccgcaagtggcgagaagttgccgccaagcgcgccattttgccgctt
ggggtgcctgcgccgcttggccctatgttacctgaacccaagccaatcagttttaaagaa
cgttttcaatcaacaagcaagctaacctcgagcgaacaatgggcggcgggagaggggcag
gcaaaacgtattctgaccacatttattgagcaaaaggcccaagactataagcaggatagg
gattttcccgctctcgacggcactagtgttatctccccttatttggcgctgggcgtgctg
agcccaaggcaatgtatcgcagcgctgcttgggcgttttcccgaggttattgtcgatgac
actagccctgggcgaacctggttgaatgagcttatctggcgggagttttatcgccattta
ttagtggcttttccggatttatccaaggggcacaattttaatcgtcaggctgaccatgtg
cagtggcgtaacaaccaagctgagtttttagcatggtgcgagggcaaaacaggttacccg
attgtggatgcggcgatgcgccagctcaatcaaatcggctggatgcacaatcgactgcgc
atggtggtggcgagctttttaaccaaacacttgcttatcgactggcgttggggtgaacgc
tatttccgccagcatcttatcgacggcgatctggcggccaataacggtggctggcaatgg
tcggcgggctgtggctgtgacgctcagccctatttccgcatttttaatcccatcagccag
agcgaaaagtttgatccagatggccgctttatccgtaagtacttaccagagctagcatct
tggggcgttaaacgcttgcaccaacccaatatgcaaaaaacgccttctttatttgatgca
ccatcgcaaccgtctgactcggcttatccctgtgcaattgtggaccacaatgcggcaagg
gcgagggcgctagcagtacttggggtgctgaaaaaggcttag
DBGET
integrated database retrieval system
