Spiroplasma diminutum: SDIMI_v3c00280
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Entry
SDIMI_v3c00280 CDS
T02741
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sdi
Spiroplasma diminutum
Pathway
sdi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SDIMI_v3c00280 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdi03400
]
SDIMI_v3c00280 (ung)
Enzymes [BR:
sdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SDIMI_v3c00280 (ung)
DNA repair and recombination proteins [BR:
sdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SDIMI_v3c00280 (ung)
Prokaryotic type
SDIMI_v3c00280 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
16854657
NCBI-ProteinID:
AGR41732
UniProt:
S5M138
LinkDB
All DBs
Position
29117..29782
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AA seq
221 aa
AA seq
DB search
MEILKELDREWIDLFSQNNIVEDIENILTKIEDYKEIYPPKEDIFRVFKLIKPSEIKVII
IGQDPYHGENQANGIAFSVYNKVKTPPSLKNIFKELKNDLNIDHFDNNDLSNWVKQGVFL
INSCLTVEKGNPNSHKDLGWDKVILKILNNLTINNKDIIYCLWGNYAKKLYNSLVYKNEQ
MTIFSAHPSPFSYKNGFENSKPFSKINNILELNNNKKIDWN
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggaaattttaaaagaattagatagagaatgaattgatttattttcacaaaataatatt
gtagaagatattgaaaacattttaactaaaattgaagattataaagaaatttatcctccc
aaagaggatatttttagagtatttaaattaataaagccatcagaaataaaagtaattata
attggtcaagatccttatcatggtgaaaatcaagcaaacggtattgcttttagtgtttat
aataaggttaaaactccgcccagtttaaaaaatatatttaaagaattaaaaaatgattta
aatattgatcattttgataataacgatttgtcaaactgagttaaacaaggagtcttttta
ataaattcttgtttaactgttgaaaagggaaatccaaattctcataaagatttaggttga
gataaagtaattttaaaaatcttaaataatctaacaataaataataaagatattatttat
tgtttatggggaaattatgcaaaaaaactatataatagtcttgtatataaaaatgaacag
atgactatattttcagctcatccatcaccatttagttataaaaatggttttgaaaatagt
aaaccattttcaaaaataaataatattttagaactaaacaataataaaaagattgactga
aattaa
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