Sulfurospirillum deleyianum: Sdel_0400
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Entry
Sdel_0400 CDS
T01126
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sdl
Sulfurospirillum deleyianum
Pathway
sdl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sdel_0400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdl03400
]
Sdel_0400
Enzymes [BR:
sdl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sdel_0400
DNA repair and recombination proteins [BR:
sdl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sdel_0400
RecFOR pathway proteins
Sdel_0400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
NB-ARC
Mg_chelatase
AAA_14
nSTAND3
TIP49
AAA_2
DUF815
AAA_22
RNA_helicase
T2SSE
Sigma54_activ_2
AAA_3
MCM
IstB_IS21
AAA_18
AAA_PrkA
Rad17
HAMP_2
Motif
Other DBs
NCBI-ProteinID:
ACZ11437
UniProt:
D1AZH0
LinkDB
All DBs
Position
complement(387754..388776)
Genome browser
AA seq
340 aa
AA seq
DB search
MERIVEIEKVSFESEYEKSLRPTSFEEYIGQEKIKKNLQVFIQAALKRSECLDHILFFGP
PGLGKTTLAYIVSNEMRANIKITAAPMIEKSGDLAAILTNLQEGDILFIDEIHRLSPAIE
EILYPAMEDFRLDIIIGSGPAAQTIKIDLPHFTLIGATTRAGMISSPLRDRFGMHFRLQF
YTKEELALIITKASYKLEKRCLNDAAFEMARRSRGTPRIALRLLKRIRDYADVVDETEIY
KERAQYGLNELGVNDLGFDELDLKYLELLLQSKGRPLGLSTIAAALSEDEGTIEDVIEPY
LLANSYIERTARGRIASPKTYELFRLTPPTLQSTLFEDNA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcattgtagaaatcgaaaaagtctcctttgagagtgagtatgaaaaaagtctt
cgccccacttcttttgaagagtatattggacaagaaaaaatcaagaaaaatctgcaagtc
tttattcaagcagcccttaaacgctcagagtgtttagaccacattcttttctttggtcct
ccaggtcttggtaaaacaaccttagcctatattgtttccaatgaaatgcgtgctaatatc
aaaattactgctgctcctatgattgaaaaaagtggcgatttagcggcgattttaaccaat
cttcaagagggagatattttatttattgatgaaattcatagactctctcctgcgattgag
gagattctctatcctgcgatggaagattttcgtttggatattatcatcggttcaggacct
gcggcacaaacgattaaaattgacttgcctcattttacgcttattggagcaaccacccgt
gcgggaatgatcagctcacctttgcgagatcgctttggtatgcattttcgtctacaattt
tataccaaagaggagttagcgcttattattaccaaagcctcttataaactcgaaaaacgc
tgtttaaacgatgcagcatttgagatggcaagacgttcacgtggcacacctcgtattgca
ttacggttgttaaaacgtattcgtgattatgcggatgtggtggatgaaacagaaatttat
aaagaacgagcccagtatggcttaaatgagctgggtgtaaatgatttgggctttgatgaa
ttggatttaaaatatttagaacttttgcttcaaagtaaaggtcgtcctttgggtcttagt
acgattgcagcagctctaagcgaagacgaggggacgattgaggatgtgatagagccttat
ttgcttgcaaatagctacattgaacgcaccgctcgtgggcgcattgcaagtcctaaaacg
tacgaactctttcgtcttaccccacccacattgcaaagcacactctttgaggataacgca
tga
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