Shewanella denitrificans: Sden_2545
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Entry
Sden_2545 CDS
T00344
Name
(GenBank) GAF sensor signal transduction histidine kinase
Organism
sdn
Shewanella denitrificans
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Gene cluster
GFIT
Motif
Pfam:
HATPase_c
GAF
GAF_2
HisKA
DUF5930
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
ABE55824
UniProt:
Q12L52
LinkDB
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Position
complement(3043355..3044719)
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AA seq
454 aa
AA seq
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MDIELKNLLFEINKSPVIDDGDLTVASELIVNAITKGLTISRAGIWLLSEDKQQLKSYLL
KEAKQTIANISLQRSGFPVFFNALDKELNLVIHREEDDYIHSEFLDAYLIPNDITSLIAS
PIRHHGEMVGVLIAEQTSLVKPWSLDDEDFVCALAGVFGRVLGAKQTLTYQQKLTQINAE
LEAQVTLRTQALNEALNNLHVTQSTLLESEKMAALGSLVAGVAHEVNTPLGIAVTSVSHC
IDELNLLKKRFSSNELDEEDFVAFIDTLSDGLQLIDRNLSRAAELVHNFKRTAADQLTLE
KERFNLSHYLEQISSPLRPLTRKHNIRLDINITDDIFVESYPGAIAQIFTNLVSNCFRHA
YPVSFIGDKQIVLGAERCGDEIKMYYKDNGKGLTPEVKDKIFEPFFTTARNEGGTGLGMS
IVFNLVNKTLGGRLVLLSDIDQGLEIDIFIQATE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggatattgaattaaaaaatttattatttgaaattaataagtcgcccgtaattgatgat
ggcgatttgaccgtggcttctgagctgattgttaacgccatcactaaaggcttaacgatt
agccgagcgggcatttggctactgagtgaagataagcagcaattaaaaagttacctgctt
aaagaagcgaaacagacgattgccaatattagcctgcaacgctcaggttttccggtattt
tttaatgcactcgataaggagctaaatctcgttattcatcgtgaagaagatgactatatt
cattctgagtttttagacgcttaccttatccccaatgatatcactagcctcattgccagc
cctatccgtcatcatggtgagatggttggggtattaatagcagagcaaacatcgctagtt
aagccctggagtttggacgatgaagactttgtttgtgcattagcgggcgtttttggcagg
gtgttgggcgcaaagcaaacgctcacttatcaacagaaactcactcagattaatgcagaa
cttgaagctcaagtgactctgcgcactcaggccttgaatgaagcgttaaataacttacac
gtcactcagtcgactttactcgaaagtgagaaaatggcggctttaggtagcctagtcgcc
ggtgtcgctcatgaagtgaatacccccctcggtatagcggtcacctcagtgagccattgt
atcgatgagcttaatttacttaagaagcgtttttctagtaatgagcttgatgaagaagac
tttgtggctttcatcgataccttatctgatggcttgcaattgattgatcgcaacctttca
cgggccgctgagttggtgcataactttaagcgtaccgcagcagatcaactgaccttagag
aaagagcgttttaatttatcccattatttagaacagatctcaagtccccttaggccattg
actcgaaagcacaatattcgattagatataaatattactgatgatatttttgttgaatcc
taccctggtgccatagcacaaattttcacaaacttagtttccaattgttttcgccatgcg
tatccagtcagttttattggcgacaaacagatagtcttaggtgctgaacgctgtggtgat
gaaattaaaatgtattataaagataacggcaagggcttaacccctgaagtgaaagataaa
atattcgaacctttttttactactgctagaaacgaaggcgggacaggacttggaatgtcg
atagtgtttaacttagtgaataaaaccttaggtgggcgtctggtattactctcagacata
gatcaagggttagagatagatatttttatccaggcgactgaataa
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