Shewanella denitrificans: Sden_2867
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Entry
Sden_2867 CDS
T00344
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sden_2867
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdn01007
]
Sden_2867
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdn03016
]
Sden_2867
Enzymes [BR:
sdn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
Sden_2867
Amino acid related enzymes [BR:
sdn01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Sden_2867
Transfer RNA biogenesis [BR:
sdn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Sden_2867
Prokaryotic type
Sden_2867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
ABC_tran_CTD
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
ABE56146
UniProt:
Q12K80
LinkDB
All DBs
Position
3423795..3426701
Genome browser
AA seq
968 aa
AA seq
DB search
MEKTYNPKSIEQALYQNWEEQGYFKPHGDESKGNYCIMIPPPNVTGSLHMGHAFQDTIMD
TLTRYQRMKGKNTLWQVGTDHAGIATQMLVERKLEAEEGKTRHDLGRDAFIDKVWDWKAQ
SGGTITKQLRRMGASVDWDRERFTMDEGLSKAVQEVFVRLYDDELIYRGKRLVNWDPKLH
TAISDLEVENKEKQGHMWHFRYPLAEGALTADGKDYLEVATTRPETMLGDSAVAVHPDDE
RYQSLIGKFILLPIVNRLIPIVADDYVDMAFGTGCVKITPAHDFNDYEVGKRHQLPMYNI
FTLDAAVRSFVEVINTDGTPNKDVELALPERYVGLDRFKARDAIVAEFETLGLLGKIDPH
GLKVPYGDRSGVVIEPLLTDQWYVAVQSMAKTAIEAVETGEIKFVPQQYENMYFSWMRDI
NDWCISRQLWWGHRIPAWYDENGKVYVGRNEAEVRAKHKLADSAVLRQDDDVLDTWFSSA
LWTFSTLGWPDNLEDLKTFHPTDVLVTGFDIIFFWVARMIMMTMHFIKDENGKPQVPFKT
VYVTGLIRDEAGNKMSKSKGNVLDPLDMIDGIELETLVEKRTGNMMQPQLAAKIEKSTRK
EFSEGIEAHGTDALRFTLAAMASTGRDINWDMKRLDGYRSFCNKLWNASRYVLMNTEVQA
DPESNAAGEPLDCGQLLVDGKPGAMELSLADRWIIGLFNQTVKTFDDHMAAYRFDLAANT
LYEFTWNQFCDWYLELTKPVMQHGSEAQMRGTRHTLVTVLEKMQRLMHPIMPYITETIWQ
RVKPLAGVTGDTLMLATFPSYQAELVDNDAMADLEWVKQVIVAVRNIRAELNIAPSKPLN
ALVRGVSYQDRIRLEANQAFFTSLAKLETITILVEGETAPMSTTQFIGDMELLIPMAGLI
DVAAEMARIDKQLEKLAQEIARIEGKLSNQGFVAKAPAAVIDKERAKMTDLSRDIEKLNE
QKIELAKI
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacatacaaccctaagtctatcgaacaggccctttaccaaaactgggaagag
caaggttacttcaagccccatggcgatgagtcaaaaggcaattattgcatcatgatcccg
ccgccgaatgtcaccggtagcttgcacatgggccatgccttccaagacaccataatggat
accttaacccgctatcaacgcatgaagggcaaaaacaccctttggcaagtgggtactgac
cacgccggtatcgccacccaaatgttggttgagcgcaaactcgaagccgaagaaggcaag
actcgccatgatttgggccgtgatgcctttatcgataaagtgtgggactggaaagcacaa
tctggcggcactatcaccaaacagcttcgccgtatgggcgcctcagtcgattgggacaga
gagcgtttcaccatggacgaaggcctgtctaaagccgttcaagaagtgtttgtgcgcctc
tatgatgatgaactcatttaccgtggcaagcgcctagttaactgggatcctaagcttcat
accgcaatttcagacttagaagttgaaaacaaagagaagcaaggccacatgtggcatttt
cgctatcctttggctgaaggcgcattaacagccgatggtaaagactatttagaagtcgcc
accacccgcccagaaaccatgctgggtgacagcgccgtcgccgtgcacccagatgatgag
cgttaccagtcactcattggcaaattcattctattgcccatcgttaatcgtttaattccc
attgtggccgacgattatgtggacatggcatttggcacaggttgtgtgaaaatcacccca
gcccatgactttaacgactatgaagtcggtaagcgtcatcaattgcctatgtacaacatc
ttcactctagatgccgctgtgcgcagttttgtagaagtcatcaacacagatggcacgcca
aacaaagacgttgaacttgccctacctgagcgttacgttggccttgaccgctttaaagcc
cgtgatgctatcgttgcagagtttgagaccttaggtttacttggcaaaatcgatccccac
ggcttaaaagtgccctatggcgatcgctcaggggtggtgattgagccattactgacagat
cagtggtacgttgcggttcagtctatggccaaaaccgccatcgaagcggttgaaaccggt
gaaattaagtttgtgccccagcaatacgagaacatgtatttctcctggatgcgcgacatt
aacgattggtgtatttcgcgccagttgtggtggggacaccgcattccagcttggtacgat
gaaaacggtaaggtctatgtgggccgcaatgaagccgaagtgcgcgctaagcataagctt
gcggactctgccgtattgcgccaagacgatgacgtattagatacctggtttagctcggcc
ctgtggaccttctcaaccttaggctggcctgacaacttagaagacttaaaaaccttccac
ccaaccgatgtattggtcacaggttttgacatcatcttcttctgggttgccaggatgatc
atgatgacaatgcatttcatcaaggatgaaaacggcaaaccacaggtgccctttaaaacc
gtgtatgtcacagggctaattcgtgatgaagccggcaacaagatgtcaaaatctaaaggc
aacgtgctcgatccactagatatgattgacggcatcgagcttgaaaccttagttgaaaag
cgcactggcaacatgatgcagccgcagcttgccgccaaaattgaaaagagcactcgcaaa
gaatttagcgaaggcatcgaagcccacggcacagatgcactgcgatttaccttagcggcc
atggcatcgacgggccgcgacatcaactgggacatgaagcgtcttgatggttaccgcagt
ttctgtaacaagttatggaatgcctcacgctatgtgttaatgaacacagaggtgcaagcc
gatcctgaaagcaacgccgctggtgagccgttagattgtggtcaactcttagttgatggc
aagcctggtgccatggagctgtcattggcggatcgctggatcatcggcttatttaaccaa
accgtgaaaaccttcgatgaccatatggccgcctaccgttttgacctagccgccaacacc
ttatacgagttcacttggaaccaattctgtgactggtatttggagctaacaaagccggta
atgcaacacggcagcgaagcgcaaatgcgcggtactcgccataccttagtgacagtgctt
gagaagatgcagcgtttgatgcaccccatcatgccctacatcactgaaaccatttggcag
cgggttaagccactcgctggcgtgactggcgataccttgatgcttgcaaccttcccaagc
tatcaagctgagcttgtggacaatgatgccatggcagatcttgagtgggtgaaacaagtt
atcgtcgctgtgcgtaatattcgcgccgagcttaacatagccccttctaagccactgaat
gccctagtgcgcggcgtgagctaccaagaccgtatccgtcttgaagctaaccaagccttc
ttcacgagtcttgcgaaattggaaaccatcaccatacttgttgaaggtgaaaccgccccc
atgtccaccacccaatttattggcgacatggagctactcattccaatggcaggcttgatc
gatgtggccgcggaaatggcccgtatcgacaagcagttagaaaagctagcccaagaaatt
gcccgcatcgaaggcaaattatcgaatcaaggttttgtggccaaagccccagccgccgtt
atcgataaagaacgcgccaagatgaccgacttaagccgtgatattgaaaaattgaacgag
caaaaaatcgagctcgccaagatttaa
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