Shewanella denitrificans: Sden_3075
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Entry
Sden_3075 CDS
T00344
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00330
Arginine and proline metabolism
sdn00480
Glutathione metabolism
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
sdn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Sden_3075
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Sden_3075
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Sden_3075
Enzymes [BR:
sdn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
Sden_3075
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ABE56353
UniProt:
Q12JM3
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Position
complement(3693619..3694794)
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AA seq
391 aa
AA seq
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MSQFQSIDVADYYETDTFNQIKEFAKDKPTPFVVIDTKIIAKQYDDMVKNFPYANVYYAV
KANPAKEVLTLLRDKGSNFDIASIYELEMVTSIGVSADRISYGNTIKKRVDVRSFYEQGV
RMFASDSEADLRMIAEEAPGSKIYVRILTEGTHTADWPLSRKFGCQNEMAYDLLVLAREL
GLVPHGISFHVGSQQRDIGAWDSAIGKVKGIYDRLKEEHGIQLKMINLGGGFPANYIDKT
NELATYAEQITHFLKEDFGDDLPEVILEPGRSLLSNAGVLVSEVVLISRKSNTALERWVF
TDVGKFSGLIETTDEAIKFPIYTDRTGELDKCVIAGPTCDSADIMYEHYSYGLPKDLAIG
DRMFWLTAGAYTTTYSAVCFNGFPPLKDYYL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatttcaatcgattgatgttgcagattattatgagacggacacttttaaccag
atcaaggagtttgccaaagacaaaccgactcctttcgtggtcatagataccaagatcatt
gcgaaacaatacgatgacatggtgaagaatttcccttatgcgaatgtgtattatgcagtc
aaggcaaatccggccaaagaagtgttaaccctgttgcgggataaaggctccaatttcgat
atcgcctcaatttatgaattagaaatggtgacctctatcggtgtgtctgccgatcgtatc
agttacggtaacaccattaagaagcgtgtggatgtgcgttctttctatgagcaaggggta
cgcatgtttgcctctgactcagaagccgatttacgcatgatcgccgaagaagccccaggc
tcaaaaatctacgtgcgcattcttactgaaggcacccacacggctgactggccgttatcg
cgcaaatttggctgtcaaaatgaaatggcctatgacttattggtcttagctcgtgagctt
ggcctagtgccacacggtatttcattccatgtgggttctcagcagcgtgatatcggtgct
tgggacagtgcaattggcaaagttaaaggcatctacgatcgccttaaagaagagcacggt
atccagcttaagatgattaacttaggtggcggtttcccagccaactatatcgacaagacc
aacgaactggcgacctatgccgagcagatcacccatttcctaaaagaagatttcggtgat
gatttacctgaggttattttagagccagggcgttcattattgtctaatgcgggtgtgcta
gtgtctgaagtggtattgatttctcgcaagtcaaacaccgcccttgagcgctgggtcttt
accgatgtgggtaagttttcaggcttaattgaaaccacagatgaagcgattaagttccct
atatataccgatagaaccggtgagttagataagtgcgttatcgcaggaccaacctgtgac
agtgccgatatcatgtatgagcactacagctacggcttacctaaagatcttgccattggc
gatcgcatgttctggttaacggcgggtgcctataccaccacgtattcggcggtatgcttt
aatggtttcccaccacttaaagattactatttgtaa
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