Sulfitobacter donghicola: SD1155_00765
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Entry
SD1155_00765 CDS
T05893
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sdo
Sulfitobacter donghicola
Pathway
sdo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sdo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SD1155_00765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdo03021
]
SD1155_00765
03400 DNA repair and recombination proteins [BR:
sdo03400
]
SD1155_00765
Enzymes [BR:
sdo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SD1155_00765
Transcription machinery [BR:
sdo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SD1155_00765
DNA repair and recombination proteins [BR:
sdo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SD1155_00765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF961
PmbA_TldD_1st
Motif
Other DBs
NCBI-ProteinID:
QAV30179
LinkDB
All DBs
Position
complement(141584..142528)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPRIETIEISEDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGSAVKYIEIEG
VLHEFSAVDNVVEDVSTIIMNIKKLALKIYSEEDKTLEIDVKDEGEVTASDITHDSDVEI
LNPELKIATVSKGGHLKVRLVANKGRGYALAETNNTSDLPIGVIPVDSLYSPVERVNYTV
ENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKIMTEHLNIFVGLTDEAQNAEIMIEK
EEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVK
YKLEDLGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaatcgaaaaacctagaattgagacaattgaaattagtgaagatgctaaattc
ggtaagttcgttgttgaaccacttgaacgtggctacggtactacactaggaaactcctta
cgtcgtatcctactatcttcattaccaggatcagcagttaagtacatcgaaattgaaggc
gtgttacacgaattctcagcagtagataatgttgttgaagatgtatctactattattatg
aacatcaaaaagctagcattaaaaatctattctgaagaagataaaactttagaaatcgat
gttaaggatgaaggtgaagttactgcaagtgatattactcacgacagtgatgtagagatt
ttaaatcctgaacttaaaattgctactgtttctaaaggtggacatttaaaagttcgtctt
gttgctaataagggtagaggttacgcattagctgaaacaaataatactagtgatttacca
attggtgtaattccagtagattcactatattcacctgtagaacgtgttaactatacagta
gaaaacacgcgtgtaggtcaaagtagtgattttgataaattaactttagatgtttggact
aatggttcaatcactcctcaagaatcagtatcattagcagcaaaaataatgactgaacac
ttgaatatctttgtaggtctaactgatgaagcgcaaaatgctgaaattatgatcgaaaaa
gaggaagatcaaaaagaaaaagtattagaaatgtctattgaagaattagacttatctgta
cgttcttataactgcttgaaacgcgcaggaatcaattctgtacaagagttagctgataaa
tctgaagctgacatgatgaaagtgcgtaatttaggtcgtaaatctcttgaagaagtaaaa
tataaattagaagatttaggattaggattaagaaaagaagattga
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