KEGG   Sphingomonas donggukensis: M9980_01120
Entry
M9980_01120       CDS       T08944                                 
Name
(GenBank) conjugal transfer protein TraI
  KO
K20533  type IV secretion system protein TrbI
Organism
sdon  Sphingomonas donggukensis
Pathway
sdon02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sdon00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    M9980_01120
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sdon02044]
    M9980_01120
Secretion system [BR:sdon02044]
 Type IV secretion system
  Trb secretion system protein
   M9980_01120
SSDB
Motif
Pfam: TrbI gp12-short_mid
Other DBs
NCBI-ProteinID: URW75865
LinkDB
Position
complement(232237..233421)
AA seq 394 aa
MTDETLSSPARSEAEIARDMQLRSPPPRVVRLSRKALVVTGGIAAAALSAALFYALQTDR
HDAPTELINTDSRQPTEALAKLPKDYAGVPRLGPPLPGDLGRPMLAAGVPPEPIAASTPA
PSDPAAQARAAALQRMAQERDAARTSRLFSTDAQAPAAGAPATPPPVEVAATAATQTPAS
DARTAFLTRPTDTDTIASGRLAAPASPYILQAGAVIPAALITGLRSDLPGQVTAQVTENV
FDGPSGRFLLVPQGSRLIGQYDAETRFGQRRALLVWNRLILPDGRSLMLDRQPGADAQGF
AGLEDKVDNHWGQIFRAALISTLLSVGTEAGSATEEDGLVRALRSGSSDAIAQAGSQIVG
RSLDIQPTLTIRPGYPVRVIVTRDLILEPWIGGA
NT seq 1185 nt   +upstreamnt  +downstreamnt
atgaccgacgaaacgctcagctccccggcgcgcagcgaagccgagatcgcgcgcgacatg
caactgcgcagcccgccaccccgtgtcgtgcggctgtcgcgcaaggcgttggtggtaacc
ggcggtatcgccgccgccgcgctgagcgcggcgctcttttacgcactgcaaaccgatcga
cacgacgcgccgaccgagctcatcaacaccgacagtcgccagccgaccgaggcgcttgcc
aagctccccaaggattatgccggcgtgccacggttggggccgccgctacctggtgatctt
ggtcgaccgatgctggcagccggcgttcccccggagccgatcgctgcgtcgacgcccgcg
ccatccgacccagccgcacaggcgcgcgcggcagcactccaacgcatggcgcaggaacgt
gacgcggcgcggaccagccggctgttcagcaccgacgcgcaagcaccggctgccggtgcg
ccggcaaccccgccacccgtcgaggtcgcagctaccgcggcgacgcaaaccccggccagc
gacgcccgcacggcgttcctgacgcggccgacggacaccgacacgatcgccagcggccga
ctcgcagccccggccagcccctatattctccaggcgggcgcggtcattcctgctgcgctg
atcaccgggctgcgctccgatcttcccggacaagtcaccgcgcaggtgaccgagaatgtg
ttcgacgggccgagcggtcggtttttgctcgtcccgcaaggatcgcggctgatcggtcaa
tatgatgccgaaacccgcttcgggcagcgtcgtgccctgcttgtatggaatcggttaatc
ctacccgatggacgctcgctcatgctcgatcgccagccgggggcggacgcgcagggcttc
gcgggcctcgaggacaaggtggacaatcactgggggcagatctttcgcgcggcgctgata
tcgaccttgctcagtgttggcaccgaagcgggcagcgctaccgaagaggacgggctggtc
cgcgctttacgcagcggatcttcagatgcgatcgcccaggccgggagtcagattgtcggc
cgctcgctcgacatacagccgacgctcactatccgaccgggctatcccgttcgcgtgatc
gtaacgcgcgacctaatccttgaaccgtggatcggaggcgcctga

DBGET integrated database retrieval system