Sphingomonas donggukensis: M9980_06025
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Entry
M9980_06025 CDS
T08944
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
sdon
Sphingomonas donggukensis
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdon03021
]
M9980_06025 (rpoH)
Transcription machinery [BR:
sdon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M9980_06025 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
ARA70
DUF1870
Motif
Other DBs
NCBI-ProteinID:
URW76757
LinkDB
All DBs
Position
1235102..1236004
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AA seq
300 aa
AA seq
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MANGSNVPATIPALGGEQSLNRYLAEIKKFPILAPEQEYMLAKRFQEHGDPEAAAQLVTS
HLRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFEPDRGFRLATYAMWWIRASIQEF
ILRSWSLVKMGTTAAQKKLFFNLRRMKSKLDAFEDGDLSPEHLTKIATDLGVTEDEVTSM
NRRMAMGGDTSLNVPMREDGEGQWQDWLADDAPLQDTIVADAQEKTVRHDMLVEAMDDLN
DREKFILTERRLTDEPKTLEELSQVYGVSRERVRQIEVRAFEKLQKAMMRLAGGKRLLAV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacggcagcaacgtcccggcgacgattcctgcactcggcggggagcagagcctc
aaccgctatctggccgagatcaagaaattcccgattctggcgcccgagcaggagtacatg
ctcgccaagcggtttcaggagcatggcgaccctgaggccgcggcccagctggtcaccagc
cacctgcgcctcgtcgcgaagatcgcgatgggttatcgcggctacggccttccggtcagc
gagctgatttccgagggcaacatcggcttgatgcagggtgtgaagaaattcgagcccgat
cgcggttttcgcctcgcaacctatgcgatgtggtggatccgcgcgtcgatccaggaattc
atcctgcgcagctggtcgctggtgaagatgggcacgaccgcggcgcagaagaagctgttc
ttcaacctgcgccggatgaagtcgaagctggatgcgttcgaggacggcgacctgtcaccc
gagcacctcaccaagatcgcgactgacctgggcgtaaccgaggatgaggtgacctcgatg
aaccgccgcatggcgatgggcggcgacacgtcgctgaacgtgccgatgcgcgaagatggc
gagggtcagtggcaggactggctggccgacgatgcgccgctgcaggacacgatcgtcgcc
gacgcgcaggaaaagaccgtgcgtcacgacatgctggtcgaggcgatggacgacctgaac
gatcgggagaagttcatcctgaccgaacgtcgcctgaccgacgagcccaagacgctggag
gaactgagccaggtgtacggcgtcagccgcgagcgcgtccgccagatcgaggtgcgggcg
ttcgagaagctgcagaaggcgatgatgcgcctggccggcggcaagcgactgcttgccgtc
tga
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