Sphingomonas donggukensis: M9980_12805
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Entry
M9980_12805 CDS
T08944
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sdon
Sphingomonas donggukensis
Pathway
sdon03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
M9980_12805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdon03400
]
M9980_12805
DNA repair and recombination proteins [BR:
sdon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
M9980_12805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
URW75401
LinkDB
All DBs
Position
complement(2609744..2610580)
Genome browser
AA seq
278 aa
AA seq
DB search
MPARAYWQGQIRLALVSIPVEIYSATKSGASVAFRQIHEPSGKPIHYEKVVDGIGPVDRD
EIMKGFEYEKGEYVLLDEDEIAGVKLESKKTLELTQFVDVGEVDAIYYDKPYYVVPADDL
AEEAFIVLREAMRRAKKVGLGQLAMRGREYVISLKPCGRGMVLETLRYADEVNAAASYFR
DIPDAKPDADLLDLATTLIDKKSGKFDAREFHDRYVDALKDLIDRKRKSKSGKVSLDKDD
APAKGSNVVDLMAALKKSLDKPAAKPAAAKKAPAKKRA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccgcgcttattggcaaggccagatccggctcgcgctcgtgtcgattccggtc
gagatctattcggcgaccaagtcgggcgcgagcgtcgccttccggcagatccacgagccg
tcgggcaagccgatccattacgagaaggtcgtcgacggcatcggcccggtcgaccgcgac
gagatcatgaaggggttcgaatatgagaagggcgagtacgtcctgctcgacgaggacgag
atcgcgggcgtcaagctggagagcaagaagacgctggagctgacccagttcgtcgacgtc
ggcgaggtcgatgcgatctactacgacaagccctattacgtggtgcccgccgacgatctg
gccgaggaagccttcatcgtgctgcgcgaggcgatgcggcgggcgaagaaggtggggctg
ggccagctggcgatgcggggccgcgaatatgtcatcagcctgaagccatgcgggcgcggc
atggtgctggaaacgctgcgctatgccgacgaagtcaatgccgccgcgagctatttccgc
gacattcccgatgccaagcccgatgccgatttgctcgatctggcgacgacgctgatcgac
aagaaatcgggcaagttcgatgcgcgtgagttccacgaccgctatgtcgacgcgctgaag
gacctgatcgaccgcaagcgcaagtcgaagtcggggaaggtgtcgctcgacaaggacgat
gccccggcgaagggatcgaacgtggtcgatctgatggcggcgctgaagaagtcgctcgac
aagccggcggcgaaaccggcggcggccaagaaggctccggcgaagaagcgcgcctga
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